Variant report

Variant	rs571128745
Chromosome Location	chr3:160753817-160753818
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931072	chr3:160669567-161159779	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
2	nsv979791	chr3:160753362-160754754	Enhancers Flanking Active TSS Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:160745200-160782600	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr3:160749800-160759000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr3:160752200-160755200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr3:160752200-160755200	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr3:160753000-160754000	Enhancers	Primary B cells from peripheral blood	blood
6	chr3:160753000-160754000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
7	chr3:160753000-160754200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr3:160753000-160754200	Enhancers	Muscle Satellite Cultured Cells	--
9	chr3:160753000-160755000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr3:160753200-160754000	Flanking Active TSS	Primary hematopoietic stem cells	blood
11	chr3:160753200-160754200	Flanking Active TSS	HUVEC	blood vessel
12	chr3:160753400-160754400	Enhancers	Osteobl	bone
13	chr3:160753600-160754000	Active TSS	Primary hematopoietic stem cells short term culture	blood
14	chr3:160753800-160754400	Enhancers	NH-A	brain
15	chr3:160753800-160755000	Enhancers	Primary B cells from cord blood	blood
16	chr3:160753800-160755200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr3:160753800-160763200	Weak transcription	Primary T cells from cord blood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links