The 2.0 version of rSNPBase

Variant report

Variant rs571129400
Chromosome Location chr11:8627507-8627508
allele -/A
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8623400-8634200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr11:8623600-8632000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:8625200-8627600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr11:8625200-8627800 Enhancers HMEC breast
5 chr11:8625200-8628000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr11:8625200-8628600 Enhancers Muscle Satellite Cultured Cells --
7 chr11:8625400-8627800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr11:8625400-8628400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr11:8625400-8628400 Enhancers HSMM muscle
10 chr11:8625600-8628800 Enhancers HSMMtube muscle
11 chr11:8626000-8629800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr11:8626000-8637000 Weak transcription Fetal Intestine Small intestine
13 chr11:8626000-8637200 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr11:8626000-8661600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr11:8626000-8661800 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr11:8626200-8629000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr11:8626200-8637200 Weak transcription Primary monocytes fromperipheralblood blood
18 chr11:8626200-8653000 Weak transcription Rectal Smooth Muscle rectum
19 chr11:8626400-8630000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr11:8626400-8630000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr11:8626400-8634000 Weak transcription Placenta Placenta
22 chr11:8626400-8634200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr11:8626400-8636000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr11:8626400-8636200 Weak transcription Stomach Smooth Muscle stomach
25 chr11:8626400-8636800 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr11:8626400-8637200 Weak transcription Pancreas Pancrea
27 chr11:8626400-8637400 Weak transcription Adipose Nuclei Adipose
28 chr11:8626400-8638400 Weak transcription Duodenum Mucosa Duodenum
29 chr11:8626400-8638400 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr11:8626400-8643400 Weak transcription Fetal Lung lung
31 chr11:8626600-8627800 Enhancers NHEK skin
32 chr11:8626600-8630000 Weak transcription NH-A brain
33 chr11:8626600-8637200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr11:8626600-8639600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr11:8626600-8648800 Weak transcription Stomach Mucosa stomach
36 chr11:8626800-8627800 Enhancers A549 lung
37 chr11:8626800-8629800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr11:8626800-8630000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr11:8626800-8630000 Weak transcription NHDF-Ad bronchial
40 chr11:8626800-8630000 Weak transcription NHLF lung
41 chr11:8626800-8630000 Weak transcription Osteobl bone
42 chr11:8626800-8637000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr11:8626800-8637200 Weak transcription Esophagus oesophagus
44 chr11:8626800-8659600 Weak transcription Hela-S3 cervix
45 chr11:8627400-8630000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015