Variant report
| Variant | rs571146402 |
|---|---|
| Chromosome Location | chr12:40414062-40414063 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:40394400-40448400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 2 | chr12:40402200-40425600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 3 | chr12:40405400-40445200 | Weak transcription | K562 | blood |
| 4 | chr12:40405600-40417000 | Weak transcription | Lung | lung |
| 5 | chr12:40405800-40421000 | Weak transcription | Left Ventricle | heart |
| 6 | chr12:40405800-40425800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 7 | chr12:40405800-40426000 | Weak transcription | Pancreas | Pancrea |
| 8 | chr12:40406000-40423200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 9 | chr12:40406600-40423200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 10 | chr12:40406600-40425800 | Weak transcription | Liver | Liver |
| 11 | chr12:40407800-40426000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 12 | chr12:40409600-40426000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 13 | chr12:40410000-40417200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 14 | chr12:40410000-40422200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 15 | chr12:40411000-40417000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 16 | chr12:40411000-40418800 | Weak transcription | Aorta | Aorta |
| 17 | chr12:40411400-40416800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 18 | chr12:40411400-40428200 | Weak transcription | Colon Smooth Muscle | Colon |
| 19 | chr12:40411400-40428600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 20 | chr12:40411600-40416800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 21 | chr12:40411600-40418800 | Weak transcription | Right Atrium | heart |
| 22 | chr12:40411600-40422000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 23 | chr12:40411600-40424000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 24 | chr12:40411600-40425600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 25 | chr12:40411600-40426200 | Weak transcription | Esophagus | oesophagus |
| 26 | chr12:40411800-40425200 | Weak transcription | Fetal Intestine Small | intestine |
| 27 | chr12:40411800-40425600 | Weak transcription | Fetal Intestine Large | intestine |
| 28 | chr12:40411800-40425600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 29 | chr12:40411800-40426400 | Weak transcription | Right Ventricle | heart |
| 30 | chr12:40412400-40417200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 31 | chr12:40412400-40417400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 32 | chr12:40412600-40417000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 33 | chr12:40412800-40414400 | Enhancers | H1 Cell Line | embryonic stem cell |
| 34 | chr12:40412800-40415800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 35 | chr12:40412800-40417200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 36 | chr12:40413000-40414200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 37 | chr12:40413000-40415200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 38 | chr12:40413000-40416000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 39 | chr12:40413600-40417000 | Weak transcription | Brain Germinal Matrix | brain |
| 40 | chr12:40413800-40414200 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
| 41 | chr12:40414000-40414400 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
