Variant report

Variant	rs571201291
Chromosome Location	chr11:93591739-93591740
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv898182	chr11:93381845-93637462	Strong transcription Genic enhancers Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
3	nsv975968	chr11:93591410-93597199	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93589600-93592800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:93589600-93593200	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr11:93589600-93594600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr11:93589800-93593200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr11:93589800-93593800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr11:93589800-93595000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr11:93590000-93592000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
8	chr11:93590000-93592800	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr11:93590200-93592000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr11:93590200-93594000	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr11:93590400-93591800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr11:93590600-93591800	Enhancers	Aorta	Aorta
13	chr11:93590600-93591800	Enhancers	Fetal Muscle Leg	muscle
14	chr11:93590600-93592000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr11:93590600-93592000	Enhancers	Fetal Brain Male	brain
16	chr11:93591000-93592000	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr11:93591200-93594800	Weak transcription	Osteobl	bone
18	chr11:93591600-93591800	Enhancers	Brain Inferior Temporal Lobe	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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