Variant report

Variant	rs57125562
Chromosome Location	chr8:126656387-126656388
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126655040..126656552-chr8:126669129..126671544,2	MCF-7	breast:
2	chr8:126645597..126647696-chr8:126654692..126656987,2	MCF-7	breast:
3	chr8:126440357..126445683-chr8:126653712..126658704,14	MCF-7	breast:
4	chr8:126440766..126445599-chr8:126653604..126662049,19	MCF-7	breast:
5	chr8:126442067..126444916-chr8:126655931..126657930,2	K562	blood:
6	chr8:126130496..126132117-chr8:126655992..126657468,16	MCF-7	breast:

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

rs_ID	r²[population]
rs73705006	0.81[AFR][1000 genomes]

Chromatin state (count:98 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126649800-126656600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr8:126649800-126656600	Weak transcription	Stomach Mucosa	stomach
3	chr8:126649800-126660400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr8:126650400-126656400	Weak transcription	Fetal Heart	heart
5	chr8:126651000-126656400	Weak transcription	Small Intestine	intestine
6	chr8:126651000-126656400	Weak transcription	NHDF-Ad	bronchial
7	chr8:126651000-126656600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:126651200-126656400	Weak transcription	Lung	lung
9	chr8:126651400-126656600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr8:126651600-126656400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr8:126652400-126657000	Enhancers	Placenta	Placenta
12	chr8:126653200-126656400	Enhancers	Liver	Liver
13	chr8:126653200-126656400	Weak transcription	Right Ventricle	heart
14	chr8:126653200-126657400	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr8:126653400-126656400	Enhancers	A549	lung
16	chr8:126653400-126656800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr8:126653400-126657000	Enhancers	Fetal Thymus	thymus
18	chr8:126653400-126657400	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr8:126653400-126660200	Enhancers	GM12878-XiMat	blood
20	chr8:126653600-126657200	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr8:126653800-126656600	Weak transcription	Brain Angular Gyrus	brain
22	chr8:126653800-126657600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr8:126654000-126656600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr8:126654000-126656600	Weak transcription	Fetal Brain Male	brain
25	chr8:126654200-126656400	Weak transcription	Fetal Intestine Small	intestine
26	chr8:126654200-126656400	Weak transcription	Right Atrium	heart
27	chr8:126654200-126656400	Weak transcription	Osteobl	bone
28	chr8:126654200-126660000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr8:126654200-126660200	Weak transcription	Rectal Smooth Muscle	rectum
30	chr8:126654200-126661200	Weak transcription	Aorta	Aorta
31	chr8:126654400-126656400	Weak transcription	Pancreas	Pancrea
32	chr8:126654400-126656400	Weak transcription	NH-A	brain
33	chr8:126654400-126656600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr8:126654400-126656600	Weak transcription	Stomach Smooth Muscle	stomach
35	chr8:126654400-126657400	Enhancers	NHEK	skin
36	chr8:126654400-126660400	Weak transcription	Esophagus	oesophagus
37	chr8:126654600-126656400	Weak transcription	Brain Anterior Caudate	brain
38	chr8:126654600-126656400	Weak transcription	Brain Cingulate Gyrus	brain
39	chr8:126654600-126656400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr8:126654600-126656400	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr8:126654600-126656400	Weak transcription	Fetal Intestine Large	intestine
42	chr8:126654600-126656400	Weak transcription	Pancreatic Islets	Pancreatic Islet
43	chr8:126654600-126656400	Weak transcription	Fetal Muscle Leg	muscle
44	chr8:126654600-126656600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr8:126654600-126656600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr8:126654600-126656600	Weak transcription	Brain Inferior Temporal Lobe	brain
47	chr8:126654600-126656600	Weak transcription	Brain Substantia Nigra	brain
48	chr8:126654600-126656600	Weak transcription	Fetal Lung	lung
49	chr8:126654800-126656400	Weak transcription	Fetal Stomach	stomach
50	chr8:126654800-126657000	Enhancers	iPS-20b Cell Line	embryonic stem cell

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