Variant report

Variant rs571279759
Chromosome Location chr1:223537483-223537484
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223535800-223538200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
2 chr1:223535800-223538800 Active TSS Brain Inferior Temporal Lobe brain
3 chr1:223535800-223538800 Active TSS Pancreatic Islets Pancreatic Islet
4 chr1:223535800-223538800 Active TSS Ovary ovary
5 chr1:223535800-223539000 Active TSS Brain Anterior Caudate brain
6 chr1:223536000-223538200 Bivalent/Poised TSS Brain Germinal Matrix brain
7 chr1:223536000-223538400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
8 chr1:223536000-223538600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
9 chr1:223536000-223538600 Active TSS Brain Hippocampus Middle brain
10 chr1:223536200-223538600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
11 chr1:223536200-223538800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
12 chr1:223536200-223538800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
13 chr1:223536200-223539000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
14 chr1:223536200-223539000 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:223536200-223539000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
16 chr1:223536400-223537600 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:223536400-223537600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:223536400-223537600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:223536400-223537600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:223536400-223537600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:223536400-223537600 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
22 chr1:223536400-223537600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
23 chr1:223536400-223537600 Active TSS Fetal Kidney kidney
24 chr1:223536400-223537600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
25 chr1:223536400-223538000 Active TSS HSMMtube muscle
26 chr1:223536400-223538200 Bivalent/Poised TSS NHLF lung
27 chr1:223536400-223538600 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:223536600-223537600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:223536600-223537600 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
30 chr1:223536600-223537800 Active TSS Psoas Muscle Psoas
31 chr1:223536600-223538200 Active TSS ES-WA7 Cell Line embryonic stem cell
32 chr1:223536600-223538200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:223536600-223538200 Active TSS Brain Substantia Nigra brain
34 chr1:223536600-223538200 Bivalent Enhancer Spleen Spleen
35 chr1:223536600-223538400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
36 chr1:223536600-223538400 Active TSS Brain Cingulate Gyrus brain
37 chr1:223536600-223538400 Active TSS Fetal Heart heart
38 chr1:223536600-223538600 Active TSS H9 Cell Line embryonic stem cell
39 chr1:223536600-223538600 Active TSS Gastric stomach
40 chr1:223536800-223537600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:223536800-223537600 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
42 chr1:223536800-223537800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:223536800-223538200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
44 chr1:223536800-223538200 Active TSS Breast Myoepithelial Primary Cells Breast
45 chr1:223536800-223538200 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:223536800-223538200 Active TSS Aorta Aorta
47 chr1:223536800-223538200 Bivalent/Poised TSS Colon Smooth Muscle Colon
48 chr1:223536800-223538200 Bivalent/Poised TSS Fetal Brain Female brain
49 chr1:223536800-223538200 Bivalent/Poised TSS Fetal Intestine Large intestine
50 chr1:223536800-223538200 Active TSS Left Ventricle heart

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