Variant report

Variant	rs571280229
Chromosome Location	chr10:23721850-23721851
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825305	chr10:23698620-23740919	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases
2	esv18855	chr10:23721447-23721937	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23719600-23722200	Enhancers	Stomach Mucosa	stomach
2	chr10:23720200-23723800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr10:23720800-23722000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:23720800-23722000	Enhancers	Rectal Mucosa Donor 31	rectum
5	chr10:23721000-23722000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr10:23721000-23722000	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr10:23721000-23722000	Enhancers	Rectal Mucosa Donor 29	rectum
8	chr10:23721400-23722000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr10:23721400-23727400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr10:23721800-23722000	Weak transcription	Primary B cells from cord blood	blood
11	chr10:23721800-23722200	Enhancers	Hela-S3	cervix
12	chr10:23721800-23722200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
13	chr10:23721800-23727200	Weak transcription	HMEC	breast
14	chr10:23721800-23727400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr10:23721800-23727400	Weak transcription	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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