The 2.0 version of rSNPBase

Variant report

Variant rs571313743
Chromosome Location chr16:48573621-48573622
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48561000-48574400 Weak transcription Fetal Intestine Large intestine
2 chr16:48561000-48575200 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr16:48566400-48583000 Weak transcription Fetal Brain Male brain
4 chr16:48569200-48574000 Enhancers Brain Substantia Nigra brain
5 chr16:48569400-48578000 Strong transcription Fetal Brain Female brain
6 chr16:48569800-48580600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr16:48570000-48575200 Weak transcription H9 Cell Line embryonic stem cell
8 chr16:48570400-48575000 Weak transcription H1 Cell Line embryonic stem cell
9 chr16:48570400-48575000 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr16:48570400-48576600 Weak transcription Placenta Amnion Placenta Amnion
11 chr16:48570400-48578800 Strong transcription Brain Germinal Matrix brain
12 chr16:48570600-48574800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr16:48571000-48573800 Genic enhancers Spleen Spleen
14 chr16:48571000-48575000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr16:48571000-48575800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr16:48571000-48580600 Weak transcription NHDF-Ad bronchial
17 chr16:48571200-48574800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr16:48571200-48575000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr16:48571200-48575000 Strong transcription Fetal Intestine Small intestine
20 chr16:48571200-48576200 Weak transcription Fetal Kidney kidney
21 chr16:48571200-48576800 Weak transcription Small Intestine intestine
22 chr16:48571200-48586000 Weak transcription NH-A brain
23 chr16:48571200-48586800 Weak transcription HUVEC blood vessel
24 chr16:48571400-48576800 Weak transcription Primary B cells from cord blood blood
25 chr16:48571400-48576800 Weak transcription Aorta Aorta
26 chr16:48571600-48574400 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr16:48571600-48574400 Weak transcription NHLF lung
28 chr16:48571600-48574600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr16:48571600-48574600 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr16:48571600-48574600 Weak transcription Osteobl bone
31 chr16:48571600-48574800 Weak transcription Primary B cells from peripheral blood blood
32 chr16:48571600-48574800 Weak transcription Dnd41 blood
33 chr16:48571600-48575800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr16:48571600-48576800 Weak transcription Primary hematopoietic stem cells blood
35 chr16:48571600-48578200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr16:48571600-48586800 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr16:48571800-48573800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr16:48571800-48573800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr16:48571800-48574000 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr16:48571800-48574800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr16:48571800-48588400 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr16:48572000-48573800 Enhancers Adipose Nuclei Adipose
43 chr16:48572000-48573800 Genic enhancers Placenta Placenta
44 chr16:48572000-48574000 Weak transcription Primary monocytes fromperipheralblood blood
45 chr16:48572000-48574600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr16:48572000-48575000 Weak transcription Brain Angular Gyrus brain
47 chr16:48572000-48575800 Weak transcription Muscle Satellite Cultured Cells --
48 chr16:48572200-48573800 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr16:48572200-48574800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr16:48572200-48576200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015