Variant report

Variant	rs571335294
Chromosome Location	chr6:143647486-143647487
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GATA2	chr6:143646401-143647609	HUVEC	blood vessel:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143640797..143643763-chr6:143645649..143648147,2	K562	blood:

Variant related genes	Relation type
ENSG00000216642	TF binding region

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv965775	chr6:143647477-143649850	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143642600-143675600	Weak transcription	Left Ventricle	heart
2	chr6:143643800-143653600	Weak transcription	Ovary	ovary
3	chr6:143643800-143661200	Weak transcription	Aorta	Aorta
4	chr6:143644600-143648600	Enhancers	NHEK	skin
5	chr6:143644600-143650400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr6:143644800-143652200	Enhancers	HMEC	breast
7	chr6:143645000-143648200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
9	chr6:143645200-143656800	Weak transcription	Psoas Muscle	Psoas
10	chr6:143645400-143647800	Weak transcription	Liver	Liver
11	chr6:143645400-143648400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr6:143645600-143647600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr6:143645800-143653600	Weak transcription	Fetal Stomach	stomach
14	chr6:143645800-143655600	Weak transcription	Fetal Brain Female	brain
15	chr6:143646000-143647600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr6:143646000-143647600	Enhancers	HSMMtube	muscle
17	chr6:143646000-143647600	Enhancers	NHDF-Ad	bronchial
18	chr6:143646000-143664000	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr6:143646200-143647600	Enhancers	HSMM	muscle
20	chr6:143646200-143647600	Enhancers	HUVEC	blood vessel
21	chr6:143646200-143647600	Enhancers	Osteobl	bone
22	chr6:143646800-143650400	Weak transcription	Hela-S3	cervix
23	chr6:143647200-143654200	Weak transcription	HepG2	liver
24	chr6:143647200-143657400	Weak transcription	NHLF	lung
25	chr6:143647400-143650200	Weak transcription	NH-A	brain
26	chr6:143647400-143654000	Weak transcription	Muscle Satellite Cultured Cells	--
27	chr6:143647400-143658200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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