Variant report

Variant rs571397668
Chromosome Location chr5:180217985-180217986
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180212400-180225400 Strong transcription Thymus Thymus
2 chr5:180212800-180228600 Weak transcription Fetal Brain Male brain
3 chr5:180213800-180218000 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr5:180214000-180219200 Genic enhancers Placenta Placenta
5 chr5:180214000-180221000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr5:180214200-180219000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:180214400-180220800 Strong transcription Fetal Intestine Small intestine
8 chr5:180214400-180222600 Weak transcription Right Atrium heart
9 chr5:180214400-180222800 Weak transcription Stomach Mucosa stomach
10 chr5:180214400-180223000 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr5:180214400-180224400 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr5:180214600-180221000 Strong transcription Primary T regulatory cells fromperipheralblood blood
13 chr5:180214600-180223000 Strong transcription Primary monocytes fromperipheralblood blood
14 chr5:180214600-180223400 Strong transcription Fetal Thymus thymus
15 chr5:180214600-180224600 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr5:180214600-180227000 Weak transcription Fetal Kidney kidney
17 chr5:180214800-180220000 Strong transcription GM12878-XiMat blood
18 chr5:180214800-180220400 Genic enhancers Adipose Nuclei Adipose
19 chr5:180214800-180220600 Strong transcription Brain Germinal Matrix brain
20 chr5:180214800-180220600 Strong transcription Dnd41 blood
21 chr5:180214800-180220800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr5:180214800-180222000 Strong transcription Rectal Mucosa Donor 31 rectum
23 chr5:180214800-180226400 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr5:180215000-180218400 Weak transcription H9 Cell Line embryonic stem cell
25 chr5:180215000-180218800 Strong transcription Fetal Intestine Large intestine
26 chr5:180215000-180219600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr5:180215000-180220000 Strong transcription Primary B cells from peripheral blood blood
28 chr5:180215000-180220200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr5:180215000-180220400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr5:180215000-180220600 Strong transcription Primary T cells from cord blood blood
31 chr5:180215000-180220600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
32 chr5:180215000-180220800 Strong transcription Sigmoid Colon Sigmoid Colon
33 chr5:180215000-180223600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr5:180215200-180218000 Weak transcription Brain Inferior Temporal Lobe brain
35 chr5:180215200-180220200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr5:180215200-180220200 Strong transcription Duodenum Mucosa Duodenum
37 chr5:180215200-180222400 Strong transcription Stomach Smooth Muscle stomach
38 chr5:180215200-180222800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr5:180215200-180223000 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr5:180215200-180224000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr5:180215400-180218000 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr5:180215400-180218200 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr5:180215400-180218600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr5:180215400-180219200 Strong transcription Primary B cells from cord blood blood
45 chr5:180215400-180221000 Strong transcription Osteobl bone
46 chr5:180215400-180224600 Weak transcription Fetal Heart heart
47 chr5:180215400-180227800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr5:180215600-180218000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr5:180215600-180218000 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
50 chr5:180215600-180218000 Strong transcription Esophagus oesophagus

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