Variant report
| Variant | rs57143727 |
|---|---|
| Chromosome Location | chr12:57393275-57393276 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:57377000-57395200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 2 | chr12:57381400-57393800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr12:57381400-57395400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 4 | chr12:57381400-57396400 | Weak transcription | HMEC | breast |
| 5 | chr12:57381800-57393400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 6 | chr12:57381800-57393400 | Weak transcription | Pancreas | Pancrea |
| 7 | chr12:57381800-57395200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 8 | chr12:57381800-57396400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr12:57381800-57397000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 10 | chr12:57383000-57393600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 11 | chr12:57383200-57394400 | Weak transcription | Hela-S3 | cervix |
| 12 | chr12:57383200-57398800 | Weak transcription | Fetal Heart | heart |
| 13 | chr12:57385400-57393600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 14 | chr12:57385400-57394000 | Weak transcription | NH-A | brain |
| 15 | chr12:57385400-57395400 | Weak transcription | Stomach Mucosa | stomach |
| 16 | chr12:57385400-57396000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 17 | chr12:57385600-57393400 | Weak transcription | Left Ventricle | heart |
| 18 | chr12:57385600-57393800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr12:57385600-57394200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 20 | chr12:57385600-57394200 | Weak transcription | Ovary | ovary |
| 21 | chr12:57385600-57396200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 22 | chr12:57385800-57393800 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 23 | chr12:57385800-57394000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 24 | chr12:57385800-57394000 | Weak transcription | Colon Smooth Muscle | Colon |
| 25 | chr12:57385800-57395200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 26 | chr12:57386000-57393800 | Weak transcription | HepG2 | liver |
| 27 | chr12:57386000-57395400 | Weak transcription | HUVEC | blood vessel |
| 28 | chr12:57387000-57394200 | Weak transcription | NHLF | lung |
| 29 | chr12:57387400-57393400 | Weak transcription | Placenta | Placenta |
| 30 | chr12:57387600-57394000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr12:57387800-57395400 | Strong transcription | Fetal Stomach | stomach |
| 32 | chr12:57388400-57393400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 33 | chr12:57388400-57395200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr12:57388600-57393800 | Weak transcription | Fetal Brain Male | brain |
| 35 | chr12:57388600-57394400 | Strong transcription | Fetal Brain Female | brain |
| 36 | chr12:57388600-57395600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 37 | chr12:57388800-57394200 | Strong transcription | Brain Germinal Matrix | brain |
| 38 | chr12:57388800-57395000 | Strong transcription | Fetal Intestine Small | intestine |
| 39 | chr12:57389000-57398200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 40 | chr12:57389000-57398600 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 41 | chr12:57389000-57398600 | Strong transcription | Thymus | Thymus |
| 42 | chr12:57389200-57395000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 43 | chr12:57389200-57398600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 44 | chr12:57389200-57398600 | Strong transcription | Primary T cells from cord blood | blood |
| 45 | chr12:57389400-57395400 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 46 | chr12:57389600-57395000 | Weak transcription | Colonic Mucosa | Colon |
| 47 | chr12:57389600-57396000 | Weak transcription | Brain Angular Gyrus | brain |
| 48 | chr12:57389800-57393400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 49 | chr12:57389800-57393400 | Weak transcription | Gastric | stomach |
| 50 | chr12:57389800-57393800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
