Variant report

Variant	rs57145661
Chromosome Location	chr11:92996543-92996544
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs16918569	1.00[AMR][1000 genomes]
rs16918630	1.00[AMR][1000 genomes]
rs16918635	1.00[AMR][1000 genomes]
rs16918713	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55633705	1.00[AMR][1000 genomes]
rs55820803	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58360895	0.84[AFR][1000 genomes]
rs59344972	1.00[AMR][1000 genomes]
rs59721459	0.88[AFR][1000 genomes]
rs60191833	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60465541	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60478070	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60918454	1.00[AMR][1000 genomes]
rs61582813	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039134	chr11:92790000-93219942	Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:92994400-93000800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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