The 2.0 version of rSNPBase

Variant report

Variant rs571581679
Chromosome Location chr5:145209058-145209059
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145162800-145212800 Weak transcription Rectal Smooth Muscle rectum
2 chr5:145170600-145213400 Weak transcription Placenta Amnion Placenta Amnion
3 chr5:145172800-145214200 Weak transcription Right Ventricle heart
4 chr5:145174200-145209200 Weak transcription Colon Smooth Muscle Colon
5 chr5:145177200-145209200 Weak transcription NH-A brain
6 chr5:145179400-145209400 Weak transcription Stomach Mucosa stomach
7 chr5:145183600-145214000 Weak transcription Fetal Kidney kidney
8 chr5:145187000-145209200 Weak transcription A549 lung
9 chr5:145192800-145209200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr5:145195200-145212800 Weak transcription Colonic Mucosa Colon
11 chr5:145196200-145211800 Weak transcription Gastric stomach
12 chr5:145196800-145214000 Weak transcription Fetal Stomach stomach
13 chr5:145197800-145209200 Weak transcription Primary hematopoietic stem cells blood
14 chr5:145198000-145213600 Weak transcription Stomach Smooth Muscle stomach
15 chr5:145198200-145210200 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr5:145198800-145212000 Weak transcription Aorta Aorta
17 chr5:145201400-145209400 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr5:145201400-145214200 Weak transcription Lung lung
19 chr5:145201800-145210400 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr5:145204000-145209200 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr5:145204000-145209600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr5:145204200-145209200 Weak transcription Fetal Lung lung
23 chr5:145204200-145209600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr5:145205400-145209400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr5:145207200-145214200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr5:145207400-145212600 Weak transcription Fetal Intestine Small intestine
27 chr5:145207400-145212800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr5:145207400-145213800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr5:145207400-145214000 Weak transcription NHEK skin
30 chr5:145207600-145209200 Weak transcription K562 blood
31 chr5:145208400-145213600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr5:145208600-145209400 Enhancers Pancreas Pancrea
33 chr5:145208600-145209800 Enhancers Fetal Heart heart
34 chr5:145208800-145209800 Enhancers Hela-S3 cervix
35 chr5:145208800-145210400 Enhancers Pancreatic Islets Pancreatic Islet
36 chr5:145208800-145213400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr5:145209000-145209200 Enhancers Small Intestine intestine
38 chr5:145209000-145209400 Enhancers Ovary ovary
39 chr5:145209000-145209800 Enhancers Fetal Intestine Large intestine
40 chr5:145209000-145210000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr5:145209000-145210000 Enhancers Duodenum Mucosa Duodenum
42 chr5:145209000-145210800 Enhancers Liver Liver
43 chr5:145209000-145211000 Enhancers Muscle Satellite Cultured Cells --
44 chr5:145209000-145211200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr5:145209000-145211200 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr5:145209000-145211200 Enhancers HUVEC blood vessel
47 chr5:145209000-145211400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr5:145209000-145211600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr5:145209000-145211600 Enhancers Rectal Mucosa Donor 31 rectum
50 chr5:145209000-145213400 Enhancers HepG2 liver

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Last update: Aug 31, 2015