Variant report

Variant rs571609300
Chromosome Location chr7:27154099-27154100
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27145800-27162800 Strong transcription Primary hematopoietic stem cells short term culture blood
2 chr7:27146400-27169600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr7:27146800-27159000 Weak transcription Primary hematopoietic stem cells blood
4 chr7:27150000-27158400 Active TSS Aorta Aorta
5 chr7:27150400-27154600 Bivalent/Poised TSS NH-A brain
6 chr7:27151000-27158200 Active TSS Breast Myoepithelial Primary Cells Breast
7 chr7:27151400-27155000 Weak transcription HepG2 liver
8 chr7:27151600-27156000 Active TSS Fetal Kidney kidney
9 chr7:27151600-27156800 Bivalent/Poised TSS Fetal Lung lung
10 chr7:27151600-27159200 Active TSS Duodenum Smooth Muscle Duodenum
11 chr7:27151800-27157000 Active TSS Right Atrium heart
12 chr7:27152600-27154600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
13 chr7:27152600-27154800 Active TSS Fetal Muscle Trunk muscle
14 chr7:27152600-27157800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr7:27152600-27158000 Active TSS Esophagus oesophagus
16 chr7:27152800-27154200 Active TSS Thymus Thymus
17 chr7:27152800-27156800 Active TSS Lung lung
18 chr7:27152800-27169400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr7:27153000-27154600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
20 chr7:27153000-27154600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr7:27153200-27154200 Active TSS Colonic Mucosa Colon
22 chr7:27153200-27155400 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
23 chr7:27153200-27157400 Active TSS Stomach Smooth Muscle stomach
24 chr7:27153400-27154800 Weak transcription Pancreas Pancrea
25 chr7:27153400-27155000 Weak transcription Gastric stomach
26 chr7:27153600-27154800 Enhancers Sigmoid Colon Sigmoid Colon
27 chr7:27153600-27155200 Enhancers NHDF-Ad bronchial
28 chr7:27153800-27154200 Flanking Bivalent TSS/Enh hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr7:27153800-27154200 Flanking Bivalent TSS/Enh Fetal Thymus thymus
30 chr7:27153800-27154400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
31 chr7:27153800-27154400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr7:27153800-27154400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr7:27153800-27154400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr7:27153800-27154400 Flanking Active TSS Adipose Nuclei Adipose
35 chr7:27153800-27154400 Bivalent/Poised TSS Liver Liver
36 chr7:27153800-27154400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
37 chr7:27153800-27154400 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
38 chr7:27153800-27154400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
39 chr7:27153800-27154400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
40 chr7:27153800-27154400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
41 chr7:27153800-27154400 Flanking Active TSS Hela-S3 cervix
42 chr7:27153800-27154400 Flanking Active TSS HMEC breast
43 chr7:27153800-27154400 Flanking Active TSS NHEK skin
44 chr7:27153800-27155000 Weak transcription Small Intestine intestine
45 chr7:27153800-27155000 Flanking Active TSS HUVEC blood vessel
46 chr7:27153800-27157400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr7:27154000-27154200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
48 chr7:27154000-27154200 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr7:27154000-27154200 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
50 chr7:27154000-27154200 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links