Variant report

Variant	rs571686052
Chromosome Location	chr11:10403834-10403835
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv1037131	chr11:10401998-10429998	Enhancers Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv553477	chr11:10403539-10429998	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10398000-10404000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr11:10398000-10404000	Enhancers	Osteobl	bone
3	chr11:10400600-10407200	Weak transcription	Ovary	ovary
4	chr11:10401800-10407200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr11:10401800-10407200	Weak transcription	Fetal Muscle Leg	muscle
6	chr11:10401800-10407200	Weak transcription	Lung	lung
7	chr11:10401800-10407200	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr11:10402000-10404600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr11:10402000-10407200	Weak transcription	Colon Smooth Muscle	Colon
10	chr11:10402000-10407200	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr11:10402000-10407200	Weak transcription	Stomach Smooth Muscle	stomach
12	chr11:10402200-10407200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr11:10402200-10407200	Weak transcription	NHDF-Ad	bronchial
14	chr11:10402800-10408400	Weak transcription	Esophagus	oesophagus
15	chr11:10403000-10407200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr11:10403400-10404000	Enhancers	Muscle Satellite Cultured Cells	--
17	chr11:10403400-10404200	Weak transcription	Primary monocytes fromperipheralblood	blood
18	chr11:10403400-10408400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr11:10403800-10404600	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr11:10403800-10407200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr11:10403800-10407200	Weak transcription	Adipose Nuclei	Adipose

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