Variant report

Variant	rs571686542
Chromosome Location	chr6:102207397-102207398
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3384771	chr6:101996253-102283808	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1032499	chr6:102069885-102720998	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv3438178	chr6:102207284-102209832	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
4	esv3405587	chr6:102207384-102209557	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:102201200-102208800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:102206600-102208800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:102207000-102207600	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr6:102207200-102207400	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr6:102207200-102207400	Enhancers	Pancreatic Islets	Pancreatic Islet
6	chr6:102207200-102207600	Enhancers	H9 Cell Line	embryonic stem cell
7	chr6:102207200-102207600	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr6:102207200-102207600	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr6:102207200-102207600	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr6:102207200-102208600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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