Variant report

Variant	rs57169080
Chromosome Location	chr16:46403044-46403045
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:40 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3351345	chr16:46385802-46460549	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
2	esv3415772	chr16:46385802-46461249	ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
3	esv3348821	chr16:46385802-46461449	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
4	esv3362417	chr16:46385802-46461449	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
5	esv3418529	chr16:46385802-46461449	Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
6	esv3433355	chr16:46385802-46461449	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
7	nsv482466	chr16:46385802-46508907	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
8	nsv572449	chr16:46385922-46443964	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
9	nsv572450	chr16:46385922-46450037	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
10	nsv572451	chr16:46385922-46452565	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
11	nsv572452	chr16:46385922-46498901	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
12	nsv572453	chr16:46385922-46499613	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
13	nsv572454	chr16:46385922-46499821	Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
14	nsv572455	chr16:46385922-46500009	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
15	nsv572456	chr16:46385922-46500195	ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
16	nsv572457	chr16:46385922-46500302	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
17	nsv572458	chr16:46385922-46500451	ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
18	nsv433447	chr16:46386457-46479625	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
19	nsv572459	chr16:46386457-46539392	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
20	esv1799780	chr16:46386457-46875496	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
21	esv8334	chr16:46388327-46406293	ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
22	esv3364135	chr16:46391025-46403755	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS	n/a	n/a	inside rSNPs	n/a
23	esv9457	chr16:46391299-46404616	ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
24	esv8333	chr16:46393063-46405316	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	n/a
25	esv3379793	chr16:46393636-46413404	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
26	esv9588	chr16:46394166-46406630	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS	n/a	n/a	inside rSNPs	n/a
27	esv3496286	chr16:46394540-46403270	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
28	esv3496287	chr16:46394540-46403270	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
29	esv3388320	chr16:46395365-46408706	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
30	esv6410	chr16:46395371-46407455	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
31	esv4026	chr16:46397519-46430215	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
32	esv3364308	chr16:46398446-46404491	Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	n/a	n/a	inside rSNPs	n/a
33	esv3734	chr16:46398845-46419471	ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
34	esv3397250	chr16:46400191-46405982	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS	n/a	n/a	inside rSNPs	n/a
35	esv4857	chr16:46400687-46427079	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
36	esv1813432	chr16:46402997-46499280	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
37	esv1809860	chr16:46402997-46499613	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
38	esv1847123	chr16:46402997-46499613	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
39	esv1850910	chr16:46402997-46499613	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
40	esv1847006	chr16:46402997-46500451	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:46385800-46404000	ZNF genes & repeats	Primary B cells from cord blood	blood
2	chr16:46389200-46404000	ZNF genes & repeats	Primary T cells from cord blood	blood
3	chr16:46389200-46404000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
4	chr16:46398000-46404000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
5	chr16:46398000-46414400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr16:46398000-46416000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
7	chr16:46398200-46404000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
8	chr16:46398200-46404000	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr16:46398200-46404000	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
10	chr16:46398200-46404000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
11	chr16:46398200-46404000	ZNF genes & repeats	Adipose Nuclei	Adipose
12	chr16:46398200-46404000	ZNF genes & repeats	Liver	Liver
13	chr16:46398200-46404000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
14	chr16:46398200-46404000	ZNF genes & repeats	Fetal Intestine Large	intestine
15	chr16:46398200-46404000	ZNF genes & repeats	Rectal Mucosa Donor 31	rectum
16	chr16:46398200-46404000	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
17	chr16:46398400-46404000	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
18	chr16:46398400-46404000	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
19	chr16:46398400-46404000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
20	chr16:46398400-46404000	ZNF genes & repeats	HMEC	breast
21	chr16:46400600-46404000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
22	chr16:46400800-46404000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr16:46401000-46404000	ZNF genes & repeats	Primary T cells fromperipheralblood	blood
24	chr16:46401000-46404000	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
25	chr16:46401000-46404000	ZNF genes & repeats	Brain Germinal Matrix	brain
26	chr16:46401000-46404000	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
27	chr16:46401800-46403200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr16:46401800-46403200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr16:46401800-46403200	Weak transcription	Primary monocytes fromperipheralblood	blood
30	chr16:46401800-46403200	Weak transcription	Primary B cells from peripheral blood	blood
31	chr16:46401800-46403200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
32	chr16:46401800-46403200	Weak transcription	Brain Angular Gyrus	brain
33	chr16:46401800-46403200	Weak transcription	Brain Substantia Nigra	brain
34	chr16:46401800-46403200	Weak transcription	Esophagus	oesophagus
35	chr16:46401800-46403200	Weak transcription	Fetal Kidney	kidney
36	chr16:46401800-46403200	Weak transcription	Lung	lung
37	chr16:46401800-46403200	Weak transcription	Right Ventricle	heart
38	chr16:46401800-46403200	Weak transcription	Skeletal Muscle Male	skeletal muscle
39	chr16:46401800-46403200	Weak transcription	GM12878-XiMat	blood
40	chr16:46401800-46403200	Weak transcription	K562	blood
41	chr16:46401800-46403200	Weak transcription	NHLF	lung
42	chr16:46401800-46403400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr16:46401800-46403400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr16:46401800-46403400	Weak transcription	NHDF-Ad	bronchial
45	chr16:46401800-46403400	Weak transcription	NHEK	skin
46	chr16:46402000-46403200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr16:46402000-46403200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr16:46402000-46403200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr16:46402000-46403200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr16:46402000-46403200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood

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