Variant report
| Variant | rs57174821 |
|---|---|
| Chromosome Location | chr18:28812715-28812716 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:28807800-28813600 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr18:28808200-28813200 | Weak transcription | Fetal Heart | heart |
| 3 | chr18:28809600-28813800 | Enhancers | Fetal Intestine Large | intestine |
| 4 | chr18:28809600-28813800 | Enhancers | Fetal Intestine Small | intestine |
| 5 | chr18:28809800-28813800 | Enhancers | Duodenum Mucosa | Duodenum |
| 6 | chr18:28811200-28813800 | Weak transcription | A549 | lung |
| 7 | chr18:28811400-28813000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 8 | chr18:28811400-28813200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 9 | chr18:28811400-28813600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 10 | chr18:28811600-28813600 | Weak transcription | HMEC | breast |
| 11 | chr18:28811600-28813600 | Weak transcription | NHEK | skin |
| 12 | chr18:28811600-28813800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 13 | chr18:28811600-28813800 | Enhancers | Liver | Liver |
| 14 | chr18:28811800-28813600 | Enhancers | GM12878-XiMat | blood |
| 15 | chr18:28812000-28815000 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 16 | chr18:28812200-28814200 | Enhancers | Pancreas | Pancrea |
| 17 | chr18:28812400-28813000 | Enhancers | Left Ventricle | heart |
| 18 | chr18:28812400-28813200 | Enhancers | Fetal Kidney | kidney |
| 19 | chr18:28812600-28812800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 20 | chr18:28812600-28814200 | Flanking Active TSS | HepG2 | liver |
