Variant report

Variant	rs571807574
Chromosome Location	chr10:26768626-26768627
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894975	chr10:26343356-27014467	Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
2	nsv1043832	chr10:26669040-26809400	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv2477507	chr10:26767092-26768745	Flanking Active TSS Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3'	n/a	n/a	inside rSNPs	diseases
4	esv3365670	chr10:26767196-26769244	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Strong transcription Active TSS	n/a	n/a	inside rSNPs	diseases
5	esv3338739	chr10:26767696-26768744	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26757800-26768800	Weak transcription	Liver	Liver
2	chr10:26758000-26768800	Weak transcription	Pancreas	Pancrea
3	chr10:26758000-26769000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr10:26758000-26771800	Weak transcription	A549	lung
5	chr10:26760000-26768800	Weak transcription	Spleen	Spleen
6	chr10:26761200-26769000	Weak transcription	Lung	lung
7	chr10:26763200-26768800	Weak transcription	Duodenum Mucosa	Duodenum
8	chr10:26764000-26769800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr10:26764000-26772600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr10:26764400-26768800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
11	chr10:26764600-26769000	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr10:26764800-26768800	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr10:26765000-26768800	Enhancers	Primary T helper naive cells from peripheral blood	blood
14	chr10:26766400-26768800	Enhancers	Primary T helper cells fromperipheralblood	blood
15	chr10:26766400-26768800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr10:26766600-26768800	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr10:26767000-26768800	Enhancers	Primary neutrophils fromperipheralblood	blood
18	chr10:26767200-26769200	Enhancers	Primary B cells from peripheral blood	blood
19	chr10:26767200-26772400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr10:26767200-26777400	Enhancers	Primary monocytes fromperipheralblood	blood
21	chr10:26767400-26768800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr10:26767400-26769200	Weak transcription	Small Intestine	intestine
23	chr10:26767600-26768800	Weak transcription	Fetal Muscle Trunk	muscle
24	chr10:26767600-26768800	Enhancers	Dnd41	blood
25	chr10:26767800-26768800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr10:26767800-26768800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
27	chr10:26767800-26768800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr10:26767800-26768800	Weak transcription	Fetal Muscle Leg	muscle
29	chr10:26767800-26769000	Weak transcription	Sigmoid Colon	Sigmoid Colon
30	chr10:26768400-26768800	Enhancers	Primary T cells fromperipheralblood	blood
31	chr10:26768400-26768800	Flanking Active TSS	Primary hematopoietic stem cells	blood
32	chr10:26768400-26769000	Flanking Active TSS	Primary T cells from cord blood	blood
33	chr10:26768400-26769000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
34	chr10:26768400-26771800	Flanking Active TSS	Primary B cells from cord blood	blood
35	chr10:26768600-26768800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
36	chr10:26768600-26768800	Active TSS	Thymus	Thymus
37	chr10:26768600-26769000	Flanking Active TSS	Fetal Thymus	thymus
38	chr10:26768600-26769000	Flanking Active TSS	GM12878-XiMat	blood
39	chr10:26768600-26769200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
40	chr10:26768600-26769400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
41	chr10:26768600-26769400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
42	chr10:26768600-26770600	Enhancers	Adipose Nuclei	Adipose
43	chr10:26768600-26771800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr10:26768600-26771800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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