The 2.0 version of rSNPBase

Variant report

Variant rs571825873
Chromosome Location chr14:55566323-55566324
allele -/AA
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55557800-55568600 Weak transcription Fetal Heart heart
2 chr14:55559200-55569000 Weak transcription Esophagus oesophagus
3 chr14:55560600-55569200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr14:55561200-55568000 Weak transcription Fetal Muscle Trunk muscle
5 chr14:55561800-55568400 Weak transcription HMEC breast
6 chr14:55561800-55568800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr14:55562000-55566400 Weak transcription NHLF lung
8 chr14:55562000-55566600 Weak transcription Osteobl bone
9 chr14:55562000-55568800 Weak transcription HSMM muscle
10 chr14:55563800-55567200 Enhancers Placenta Placenta
11 chr14:55564000-55566800 Enhancers Primary T cells fromperipheralblood blood
12 chr14:55564000-55569000 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr14:55564000-55569200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr14:55564000-55570200 Enhancers Stomach Mucosa stomach
15 chr14:55564200-55567000 Weak transcription Lung lung
16 chr14:55564200-55568400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr14:55564200-55568400 Weak transcription Gastric stomach
18 chr14:55564200-55568800 Weak transcription H1 Cell Line embryonic stem cell
19 chr14:55564200-55569000 Enhancers Fetal Intestine Small intestine
20 chr14:55564400-55566800 Enhancers Monocytes-CD14+_RO01746 blood
21 chr14:55564400-55569800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr14:55564800-55568600 Weak transcription Brain Angular Gyrus brain
23 chr14:55565000-55567200 Enhancers Fetal Muscle Leg muscle
24 chr14:55565000-55568600 Weak transcription Colon Smooth Muscle Colon
25 chr14:55565000-55568600 Weak transcription A549 lung
26 chr14:55565000-55568800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr14:55565200-55566400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr14:55565200-55566400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr14:55565200-55566400 Weak transcription Adipose Nuclei Adipose
30 chr14:55565200-55566400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr14:55565200-55566400 Weak transcription HepG2 liver
32 chr14:55565200-55566400 Weak transcription NHEK skin
33 chr14:55565200-55567200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr14:55565200-55567800 Weak transcription Colonic Mucosa Colon
35 chr14:55565200-55568600 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr14:55565200-55568600 Weak transcription Brain Substantia Nigra brain
37 chr14:55565200-55569000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr14:55565200-55569000 Weak transcription Brain Anterior Caudate brain
39 chr14:55565200-55570600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr14:55565400-55566400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr14:55565400-55566400 Weak transcription Hela-S3 cervix
42 chr14:55565400-55566600 Weak transcription Right Atrium heart
43 chr14:55565400-55567800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr14:55565400-55568200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr14:55565400-55568400 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr14:55565400-55568600 Weak transcription Brain Hippocampus Middle brain
47 chr14:55565400-55568600 Weak transcription NH-A brain
48 chr14:55565400-55568800 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr14:55565400-55568800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr14:55565400-55568800 Weak transcription K562 blood

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Last update: Aug 31, 2015