Variant report

Variant	rs57183941
Chromosome Location	chr11:15591321-15591322
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs56198873	0.83[AFR][1000 genomes]
rs56798028	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050475	chr11:15584061-15620602	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15574000-15591600	Weak transcription	Right Atrium	heart
2	chr11:15585200-15610600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:15588200-15606000	Weak transcription	Left Ventricle	heart
4	chr11:15588400-15593800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr11:15589600-15592000	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr11:15589600-15592800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:15590800-15591400	Enhancers	Fetal Lung	lung
8	chr11:15590800-15591600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr11:15590800-15592200	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr11:15591000-15591400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr11:15591000-15591400	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr11:15591000-15591400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr11:15591000-15591400	Enhancers	Fetal Brain Female	brain
14	chr11:15591000-15591800	Enhancers	Fetal Stomach	stomach
15	chr11:15591000-15591800	Enhancers	Psoas Muscle	Psoas
16	chr11:15591000-15592000	Enhancers	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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