The 2.0 version of rSNPBase

Variant report

Variant rs57192575
Chromosome Location chr6:131215651-131215652
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131151600-131216600 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr6:131159000-131229000 Weak transcription Colonic Mucosa Colon
3 chr6:131170400-131217400 Weak transcription Psoas Muscle Psoas
4 chr6:131171200-131223200 Weak transcription Right Ventricle heart
5 chr6:131171400-131220200 Weak transcription Fetal Brain Male brain
6 chr6:131175000-131222400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr6:131175600-131221600 Weak transcription Rectal Smooth Muscle rectum
8 chr6:131179400-131222400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr6:131187000-131223200 Weak transcription Gastric stomach
10 chr6:131187200-131216400 Weak transcription H1 Cell Line embryonic stem cell
11 chr6:131188200-131216400 Weak transcription HSMMtube muscle
12 chr6:131190400-131227000 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr6:131190800-131224200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr6:131191000-131234400 Weak transcription Esophagus oesophagus
15 chr6:131191200-131224200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr6:131191200-131233000 Weak transcription Spleen Spleen
17 chr6:131194200-131222000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr6:131195800-131224200 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr6:131198600-131224200 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr6:131201000-131222400 Strong transcription Dnd41 blood
21 chr6:131201800-131222000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:131203600-131234200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr6:131204400-131228600 Weak transcription Stomach Mucosa stomach
24 chr6:131205200-131222000 Weak transcription A549 lung
25 chr6:131208000-131222000 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr6:131209000-131234000 Weak transcription Fetal Thymus thymus
27 chr6:131209200-131219600 Weak transcription Fetal Heart heart
28 chr6:131209600-131222000 Weak transcription HMEC breast
29 chr6:131209800-131217000 Weak transcription Brain Substantia Nigra brain
30 chr6:131209800-131228000 Weak transcription HUVEC blood vessel
31 chr6:131210600-131217800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr6:131210800-131222400 Strong transcription HepG2 liver
33 chr6:131211000-131228400 Weak transcription Small Intestine intestine
34 chr6:131211200-131222000 Weak transcription NHEK skin
35 chr6:131211200-131234000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr6:131211400-131224000 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr6:131211400-131234200 Weak transcription Primary hematopoietic stem cells blood
38 chr6:131211600-131219600 Weak transcription Duodenum Mucosa Duodenum
39 chr6:131211800-131219600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr6:131212000-131224600 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr6:131212200-131220200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr6:131212200-131221800 Weak transcription NH-A brain
43 chr6:131212200-131222000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr6:131212600-131215800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr6:131212600-131218200 Strong transcription Fetal Intestine Large intestine
46 chr6:131212800-131216400 Strong transcription Adipose Nuclei Adipose
47 chr6:131212800-131216800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr6:131212800-131217000 Strong transcription Fetal Muscle Trunk muscle
49 chr6:131213200-131215800 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr6:131213200-131216000 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015