Variant report

Variant	rs572004782
Chromosome Location	chr18:11510478-11510479
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 79 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:79 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv458029	chr18:10814334-11662151	Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
2	nsv576480	chr18:10814334-11662151	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
3	nsv1066659	chr18:11246502-11709409	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
4	nsv1057976	chr18:11251898-11664914	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
5	nsv543650	chr18:11251898-11664914	Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
6	nsv1056541	chr18:11336695-11558542	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
7	nsv543651	chr18:11336695-11558542	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
8	nsv458031	chr18:11362587-11557161	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
9	nsv576482	chr18:11362587-11557161	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
10	nsv909381	chr18:11431945-11609487	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
11	nsv2204	chr18:11499825-11544209	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
12	nsv576483	chr18:11502864-11510556	Weak transcription Enhancers Flanking Active TSS	TF binding region lncRNA	5 gene(s)	inside rSNPs	diseases
13	nsv576484	chr18:11502864-11510900	Enhancers Weak transcription Flanking Active TSS	TF binding region lncRNA	5 gene(s)	inside rSNPs	diseases
14	esv3490454	chr18:11506766-11511945	Enhancers Weak transcription Flanking Active TSS	lncRNA	2 gene(s)	inside rSNPs	diseases
15	esv3490455	chr18:11506766-11511945	Enhancers Weak transcription Flanking Active TSS	lncRNA	2 gene(s)	inside rSNPs	diseases
16	esv3316259	chr18:11507952-11513250	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv3402922	chr18:11508552-11512400	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
18	esv3316257	chr18:11508777-11512325	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
19	esv1800205	chr18:11508904-11510794	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv1800733	chr18:11508904-11510794	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
21	esv1814080	chr18:11508904-11510794	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
22	esv1817445	chr18:11508904-11510794	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv1823398	chr18:11508904-11510794	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
24	esv2656092	chr18:11508904-11510794	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
25	esv2656388	chr18:11508904-11510794	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
26	esv1814441	chr18:11508904-11511222	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
27	esv3427120	chr18:11509002-11512300	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
28	esv2586381	chr18:11509257-11512103	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
29	esv3316260	chr18:11509283-11511868	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
30	esv9579	chr18:11509439-11511669	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
31	esv2236416	chr18:11509528-11511613	Flanking Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
32	esv3497996	chr18:11509581-11511515	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
33	esv3316262	chr18:11509587-11511572	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
34	esv3497998	chr18:11509597-11511562	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
35	nsv820459	chr18:11509609-11511491	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
36	esv3317687	chr18:11509610-11511359	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
37	esv3317688	chr18:11509610-11511359	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
38	nsv512516	chr18:11509610-11511504	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
39	esv3316261	chr18:11509628-11511545	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
40	esv3316258	chr18:11509635-11511494	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
41	esv3497999	chr18:11509642-11511523	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
42	esv3498000	chr18:11509648-11511525	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
43	nsv131377	chr18:11509706-11511474	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
44	esv3316264	chr18:11509706-11511478	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
45	esv3498001	chr18:11509706-11511478	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
46	esv15616	chr18:11509973-11510808	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
47	esv18553	chr18:11509973-11511491	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
48	nsv576485	chr18:11509995-11510686	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
49	nsv576486	chr18:11509995-11510794	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
50	nsv576487	chr18:11509995-11510846	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:11502600-11513200	Weak transcription	NHDF-Ad	bronchial
2	chr18:11507000-11511800	Weak transcription	Thymus	Thymus
3	chr18:11507400-11512000	Weak transcription	Hela-S3	cervix
4	chr18:11509000-11511800	Enhancers	Dnd41	blood
5	chr18:11509800-11511800	Enhancers	Fetal Thymus	thymus

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