Variant report

Variant	rs572005376
Chromosome Location	chr8:110510545-110510546
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:110510174..110512174-chr8:110514390..110516726,2	K562	blood:
2	chr10:133996695..133999397-chr8:110508706..110510962,2	MCF-7	breast:
3	chr8:110492411..110494617-chr8:110510142..110512481,2	MCF-7	breast:
4	chr8:110506183..110508052-chr8:110509587..110512256,2	MCF-7	breast:
5	chr8:110510297..110513160-chr8:110550256..110552818,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000205038	Chromatin interaction
ENSG00000147654	Chromatin interaction
ENSG00000235010	Chromatin interaction

Extended variants
information (count: 20 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891281	chr8:110450092-110558622	Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	15 gene(s)	inside rSNPs	diseases
2	esv2554092	chr8:110509394-110511181	Inactive region	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv3428944	chr8:110509626-110511624	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	esv7340	chr8:110510055-110510876	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	esv2027303	chr8:110510118-110510820	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	esv3479822	chr8:110510199-110510717	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
7	esv3523108	chr8:110510208-110510734	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
8	esv3523104	chr8:110510210-110510744	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
9	esv3479825	chr8:110510225-110510707	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
10	esv3523105	chr8:110510237-110510666	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
11	esv3479821	chr8:110510242-110510702	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
12	esv3523102	chr8:110510252-110510682	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
13	esv3479823	chr8:110510256-110510657	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
14	esv3523103	chr8:110510256-110510741	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
15	esv3548	chr8:110510257-110510683	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
16	esv3479824	chr8:110510293-110510635	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
17	esv3523106	chr8:110510307-110510630	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
18	nsv396947	chr8:110510308-110510629	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
19	esv3479826	chr8:110510308-110510643	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
20	esv3523109	chr8:110510308-110510643	Inactive region	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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