Variant report

Variant	rs572095580
Chromosome Location	chr7:38695610-38695611
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932229	chr7:38248340-38727527	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
2	nsv966781	chr7:38694728-38696473	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38694400-38698200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:38694800-38696400	Enhancers	Fetal Muscle Leg	muscle
3	chr7:38695000-38695800	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
4	chr7:38695400-38696000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr7:38695600-38696400	Enhancers	Fetal Muscle Trunk	muscle
6	chr7:38695600-38696400	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr7:38695600-38697000	Bivalent Enhancer	Muscle Satellite Cultured Cells	--
8	chr7:38695600-38700000	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr7:38695600-38700200	Enhancers	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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