Variant report

Variant rs57214245
Chromosome Location chr2:171622053-171622054
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171613200-171626800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:171618600-171626600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr2:171619600-171626800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:171620600-171622200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
5 chr2:171620800-171622200 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr2:171620800-171622400 Enhancers H1 Cell Line embryonic stem cell
7 chr2:171620800-171622400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
8 chr2:171620800-171623200 Enhancers HUES64 Cell Line embryonic stem cell
9 chr2:171621000-171622400 Enhancers HepG2 liver
10 chr2:171621200-171622400 Enhancers Primary T cells from cord blood blood
11 chr2:171621200-171623000 Enhancers Fetal Lung lung
12 chr2:171621200-171626600 Weak transcription Liver Liver
13 chr2:171621400-171622200 Flanking Active TSS K562 blood
14 chr2:171621800-171622200 Flanking Active TSS GM12878-XiMat blood
15 chr2:171621800-171626200 Weak transcription Fetal Intestine Small intestine
16 chr2:171622000-171622200 Active TSS ES-I3 Cell Line embryonic stem cell
17 chr2:171622000-171622200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr2:171622000-171622200 Enhancers HUES6 Cell Line embryonic stem cell
19 chr2:171622000-171622400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr2:171622000-171623200 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr2:171622000-171623200 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr2:171622000-171623200 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr2:171622000-171623400 Weak transcription Stomach Mucosa stomach
24 chr2:171622000-171623600 Enhancers HUES48 Cell Line embryonic stem cell
25 chr2:171622000-171626600 Weak transcription H9 Cell Line embryonic stem cell
26 chr2:171622000-171626600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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