Variant report
| Variant | rs57216374 |
|---|---|
| Chromosome Location | chr12:1819547-1819548 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:1801600-1823400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 2 | chr12:1801600-1827800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr12:1801800-1823800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 4 | chr12:1801800-1828200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 5 | chr12:1801800-1830800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 6 | chr12:1802200-1822800 | Weak transcription | Thymus | Thymus |
| 7 | chr12:1802400-1822800 | Weak transcription | Fetal Thymus | thymus |
| 8 | chr12:1802400-1823000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr12:1802400-1824600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr12:1802400-1841200 | Weak transcription | HMEC | breast |
| 11 | chr12:1806000-1840000 | Weak transcription | Spleen | Spleen |
| 12 | chr12:1806200-1823400 | Weak transcription | Dnd41 | blood |
| 13 | chr12:1806200-1844400 | Weak transcription | NHEK | skin |
| 14 | chr12:1807200-1847400 | Weak transcription | Fetal Stomach | stomach |
| 15 | chr12:1807400-1822000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 16 | chr12:1807400-1823400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr12:1807600-1821600 | Weak transcription | Ovary | ovary |
| 18 | chr12:1808200-1820400 | Weak transcription | Fetal Lung | lung |
| 19 | chr12:1808200-1820400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 20 | chr12:1808400-1830800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 21 | chr12:1810600-1819800 | Weak transcription | Fetal Intestine Small | intestine |
| 22 | chr12:1813200-1823400 | Weak transcription | Left Ventricle | heart |
| 23 | chr12:1814400-1825400 | Weak transcription | Colon Smooth Muscle | Colon |
| 24 | chr12:1815200-1823800 | Weak transcription | HSMM | muscle |
| 25 | chr12:1815200-1827800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 26 | chr12:1816000-1821600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 27 | chr12:1816200-1820000 | Weak transcription | Pancreas | Pancrea |
| 28 | chr12:1816200-1820400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 29 | chr12:1816200-1820400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr12:1816200-1821800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 31 | chr12:1816200-1822000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 32 | chr12:1816200-1822000 | Weak transcription | Gastric | stomach |
| 33 | chr12:1816200-1822200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 34 | chr12:1816200-1825200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 35 | chr12:1816200-1825400 | Weak transcription | Osteobl | bone |
| 36 | chr12:1816200-1836400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 37 | chr12:1816200-1849400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 38 | chr12:1816200-1857800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 39 | chr12:1816200-1866400 | Weak transcription | Esophagus | oesophagus |
| 40 | chr12:1816200-1897400 | Weak transcription | Aorta | Aorta |
| 41 | chr12:1816400-1820000 | Weak transcription | Brain Anterior Caudate | brain |
| 42 | chr12:1816400-1820400 | Weak transcription | K562 | blood |
| 43 | chr12:1816400-1820600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 44 | chr12:1816400-1820800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 45 | chr12:1816400-1822000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 46 | chr12:1816400-1823000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 47 | chr12:1816400-1824600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 48 | chr12:1816400-1825200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 49 | chr12:1816400-1840200 | Weak transcription | Colonic Mucosa | Colon |
| 50 | chr12:1816400-1841400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
