Variant report

Variant rs572173073
Chromosome Location chr6:31744779-31744780
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31731800-31749600 Weak transcription HUVEC blood vessel
2 chr6:31732600-31745000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr6:31734600-31745200 Weak transcription Brain Germinal Matrix brain
4 chr6:31734600-31745400 Weak transcription Fetal Brain Female brain
5 chr6:31734600-31746600 Weak transcription Brain Angular Gyrus brain
6 chr6:31734800-31745600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr6:31738800-31745800 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr6:31739800-31746000 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr6:31740200-31744800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr6:31741000-31744800 Enhancers Primary T helper naive cells fromperipheralblood blood
11 chr6:31741000-31745600 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr6:31741200-31744800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr6:31741200-31744800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr6:31741200-31745800 Weak transcription Brain Substantia Nigra brain
15 chr6:31741400-31745600 Weak transcription Dnd41 blood
16 chr6:31741800-31745400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
17 chr6:31741800-31745600 Enhancers Placenta Placenta
18 chr6:31742600-31746000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr6:31742800-31744800 Enhancers Placenta Amnion Placenta Amnion
20 chr6:31742800-31744800 Enhancers NHEK skin
21 chr6:31742800-31745200 Enhancers Sigmoid Colon Sigmoid Colon
22 chr6:31742800-31745400 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr6:31742800-31745400 Enhancers Esophagus oesophagus
24 chr6:31742800-31745800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr6:31742800-31746400 Enhancers Liver Liver
26 chr6:31742800-31746400 Flanking Active TSS HepG2 liver
27 chr6:31743000-31745800 Enhancers Primary T helper cells PMA-I stimulated --
28 chr6:31743200-31745600 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr6:31743400-31744800 Strong transcription Right Atrium heart
30 chr6:31743400-31745200 Enhancers Lung lung
31 chr6:31743400-31745600 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr6:31743400-31745800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr6:31743400-31745800 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr6:31743600-31745000 Enhancers Psoas Muscle Psoas
35 chr6:31743600-31745000 Flanking Active TSS Stomach Mucosa stomach
36 chr6:31743600-31745800 Weak transcription H9 Cell Line embryonic stem cell
37 chr6:31743800-31745000 Enhancers Primary B cells from peripheral blood blood
38 chr6:31743800-31745000 Enhancers Gastric stomach
39 chr6:31744000-31745000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
40 chr6:31744000-31745200 Active TSS Rectal Smooth Muscle rectum
41 chr6:31744000-31745400 Enhancers Thymus Thymus
42 chr6:31744200-31744800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:31744200-31744800 Flanking Active TSS Duodenum Mucosa Duodenum
44 chr6:31744200-31745000 Flanking Active TSS Fetal Intestine Small intestine
45 chr6:31744200-31745000 Active TSS Pancreatic Islets Pancreatic Islet
46 chr6:31744200-31745200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
47 chr6:31744200-31745400 Enhancers Primary B cells from cord blood blood
48 chr6:31744200-31745400 Enhancers Fetal Lung lung
49 chr6:31744200-31745600 Enhancers Primary monocytes fromperipheralblood blood
50 chr6:31744200-31745600 Enhancers Primary hematopoietic stem cells blood

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