Variant report

Variant	rs572210785
Chromosome Location	chr11:32962154-32962155
allele	-/CTAA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32955247..32956983-chr11:32962122..32964180,2	K562	blood:

Variant related genes	Relation type
ENSG00000060749	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758262	chr11:32714643-33049940	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
2	esv2759815	chr11:32714643-33049940	Flanking Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
3	esv34742	chr11:32796092-33004024	Weak transcription Strong transcription ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
4	esv2753057	chr11:32796124-33061724	Enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
5	esv2753743	chr11:32796124-33084924	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
6	nsv1040484	chr11:32951066-33093204	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
7	nsv1046198	chr11:32954100-33075142	Active TSS Enhancers Genic enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
8	esv3358675	chr11:32960425-32981454	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32948400-32963200	Strong transcription	HUES6 Cell Line	embryonic stem cell
2	chr11:32950200-32968000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr11:32950400-32962600	Strong transcription	HUES64 Cell Line	embryonic stem cell
4	chr11:32950400-32994400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr11:32951000-32962200	Strong transcription	Dnd41	blood
6	chr11:32951200-32962600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
7	chr11:32951600-32963200	Strong transcription	H1 Cell Line	embryonic stem cell
8	chr11:32952000-32963200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr11:32952200-32962600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
10	chr11:32952400-32968000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr11:32952800-32963200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr11:32953800-32978400	Weak transcription	Fetal Intestine Small	intestine
13	chr11:32954000-32968000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr11:32954200-32968000	Weak transcription	Fetal Stomach	stomach
15	chr11:32954600-32971400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr11:32954600-32990200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr11:32954800-32968000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr11:32955000-32968600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
19	chr11:32955200-32962400	Weak transcription	Rectal Smooth Muscle	rectum
20	chr11:32955400-32994200	Weak transcription	Gastric	stomach
21	chr11:32955400-32994400	Weak transcription	Esophagus	oesophagus
22	chr11:32955600-32968000	Weak transcription	Pancreas	Pancrea
23	chr11:32955600-32987200	Weak transcription	Right Ventricle	heart
24	chr11:32955600-33000800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr11:32955600-33003800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
26	chr11:32956000-32975400	Weak transcription	Primary T helper cells PMA-I stimulated	--
27	chr11:32956200-32979400	Weak transcription	Colon Smooth Muscle	Colon
28	chr11:32956200-32994200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr11:32956800-32968000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr11:32956800-32968000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr11:32956800-32968000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr11:32956800-32975400	Weak transcription	Lung	lung
33	chr11:32956800-32975400	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr11:32956800-32975400	Weak transcription	NHEK	skin
35	chr11:32956800-32977800	Weak transcription	Left Ventricle	heart
36	chr11:32956800-32977800	Weak transcription	Thymus	Thymus
37	chr11:32956800-32994200	Weak transcription	Skeletal Muscle Male	skeletal muscle
38	chr11:32957000-32969400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
39	chr11:32957000-32978400	Weak transcription	Duodenum Mucosa	Duodenum
40	chr11:32957000-32978400	Weak transcription	Stomach Smooth Muscle	stomach
41	chr11:32957200-32968000	Weak transcription	Adipose Nuclei	Adipose
42	chr11:32957200-32968000	Weak transcription	Brain Substantia Nigra	brain
43	chr11:32957200-32968000	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr11:32957200-32969400	Weak transcription	Primary B cells from peripheral blood	blood
45	chr11:32957200-32978800	Weak transcription	Skeletal Muscle Female	skeletal muscle
46	chr11:32957200-32979200	Weak transcription	Rectal Mucosa Donor 31	rectum
47	chr11:32957400-32962400	Weak transcription	Brain Anterior Caudate	brain
48	chr11:32957400-32963800	Weak transcription	Placenta	Placenta
49	chr11:32957400-32968000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr11:32957400-32975400	Weak transcription	Fetal Brain Male	brain

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