Variant report

Variant	rs572218925
Chromosome Location	chr16:48510391-48510392
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 110 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:110 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1061316	chr16:48264175-48594219	Weak transcription Strong transcription Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	esv1800739	chr16:48418505-48560315	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
3	nsv428658	chr16:48438656-48587750	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
4	esv1836131	chr16:48504364-48510755	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	n/a
5	esv1836297	chr16:48504364-48510755	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	n/a
6	nsv572556	chr16:48504364-48510755	Weak transcription Enhancers	TF binding region	1 gene(s)	inside rSNPs	n/a
7	esv1833696	chr16:48504364-48512981	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	n/a
8	nsv511575	chr16:48504364-48512981	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	n/a
9	esv3312503	chr16:48506951-48512949	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	n/a
10	esv3312502	chr16:48507976-48512824	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	n/a
11	esv3312504	chr16:48508555-48511898	Weak transcription	n/a	n/a	inside rSNPs	n/a
12	esv3312505	chr16:48508601-48512049	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
13	esv2652423	chr16:48508681-48512467	Enhancers Bivalent Enhancer Weak transcription	TF binding region	1 gene(s)	inside rSNPs	n/a
14	esv3312506	chr16:48508783-48511700	Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv3312508	chr16:48508783-48511700	Weak transcription	n/a	n/a	inside rSNPs	n/a
16	nsv512437	chr16:48508838-48511948	Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv9835	chr16:48509288-48510957	Weak transcription	n/a	n/a	inside rSNPs	n/a
18	nsv820740	chr16:48509288-48510957	Weak transcription	n/a	n/a	inside rSNPs	n/a
19	nsv572558	chr16:48509311-48510432	Weak transcription	n/a	n/a	inside rSNPs	n/a
20	nsv572559	chr16:48509311-48510485	Weak transcription	n/a	n/a	inside rSNPs	n/a
21	nsv572560	chr16:48509311-48510539	Weak transcription	n/a	n/a	inside rSNPs	n/a
22	nsv572561	chr16:48509311-48510602	Weak transcription	n/a	n/a	inside rSNPs	n/a
23	nsv572562	chr16:48509311-48510688	Weak transcription	n/a	n/a	inside rSNPs	n/a
24	esv1805916	chr16:48509311-48510701	Weak transcription	n/a	n/a	inside rSNPs	n/a
25	esv1792241	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
26	esv1792382	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
27	esv1792903	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
28	esv1792923	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
29	esv1793171	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
30	esv1795431	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
31	esv1797247	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
32	esv1797668	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
33	esv1798033	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
34	esv1798352	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
35	esv1798698	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
36	esv1799777	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
37	esv1801454	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
38	esv1801494	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
39	esv1801684	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
40	esv1801900	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
41	esv1813872	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
42	esv1814872	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
43	esv1815533	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
44	esv1816665	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
45	esv1816860	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
46	esv1817684	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
47	esv1817864	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
48	esv1819711	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
49	esv1820583	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a
50	esv1820675	chr16:48509311-48510755	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:48508200-48512800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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