Variant report

Variant rs57222606
Chromosome Location chr18:9803513-9803514
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:9771800-9803800 Weak transcription Fetal Stomach stomach
2 chr18:9771800-9807800 Weak transcription Placenta Amnion Placenta Amnion
3 chr18:9773600-9807000 Weak transcription Lung lung
4 chr18:9775600-9806400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr18:9780200-9807000 Weak transcription Pancreas Pancrea
6 chr18:9783200-9804000 Weak transcription NHEK skin
7 chr18:9783400-9808600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr18:9792800-9807000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr18:9793200-9803800 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr18:9794200-9803600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr18:9798200-9804200 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr18:9798400-9803600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr18:9798400-9803800 Weak transcription Fetal Lung lung
14 chr18:9798800-9803600 Weak transcription Brain Germinal Matrix brain
15 chr18:9801600-9804000 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr18:9801600-9804000 Enhancers Colon Smooth Muscle Colon
17 chr18:9801600-9804200 Genic enhancers Hela-S3 cervix
18 chr18:9801600-9805200 Enhancers Cortex derived primary cultured neurospheres brain
19 chr18:9801800-9804000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr18:9801800-9804200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr18:9801800-9804800 Enhancers Brain Angular Gyrus brain
22 chr18:9801800-9804800 Enhancers Brain Hippocampus Middle brain
23 chr18:9802000-9804000 Enhancers Rectal Smooth Muscle rectum
24 chr18:9802000-9805000 Enhancers Brain Substantia Nigra brain
25 chr18:9802200-9803800 Enhancers Duodenum Smooth Muscle Duodenum
26 chr18:9802200-9804200 Weak transcription Primary B cells from peripheral blood blood
27 chr18:9802200-9804600 Enhancers Fetal Heart heart
28 chr18:9802200-9804600 Enhancers Osteobl bone
29 chr18:9802200-9804800 Enhancers Brain Cingulate Gyrus brain
30 chr18:9802400-9803800 Genic enhancers Monocytes-CD14+_RO01746 blood
31 chr18:9802400-9804000 Enhancers Primary monocytes fromperipheralblood blood
32 chr18:9802400-9804000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr18:9802400-9804200 Enhancers Primary neutrophils fromperipheralblood blood
34 chr18:9802400-9804400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr18:9802400-9804400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
36 chr18:9802400-9804600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr18:9802400-9804600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr18:9802400-9804600 Enhancers Left Ventricle heart
39 chr18:9802400-9804600 Enhancers Right Atrium heart
40 chr18:9802400-9804600 Enhancers Right Ventricle heart
41 chr18:9802400-9804600 Enhancers NHDF-Ad bronchial
42 chr18:9802400-9804800 Enhancers Aorta Aorta
43 chr18:9802400-9804800 Enhancers Brain Inferior Temporal Lobe brain
44 chr18:9802400-9804800 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr18:9802400-9805000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr18:9802400-9805000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr18:9802400-9805000 Enhancers Placenta Placenta
48 chr18:9802400-9805000 Enhancers Spleen Spleen
49 chr18:9802600-9803600 Enhancers HUES64 Cell Line embryonic stem cell
50 chr18:9802600-9803800 Enhancers iPS-18 Cell Line embryonic stem cell

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