Variant report

Variant	rs572257426
Chromosome Location	chr14:56621361-56621362
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533129	chr14:56568535-56819234	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv1844788	chr14:56594420-56771207	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv519617	chr14:56620952-56624423	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:56615400-56626800	Weak transcription	Left Ventricle	heart
2	chr14:56615600-56639800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:56615800-56623200	Weak transcription	Spleen	Spleen
4	chr14:56615800-56625800	Weak transcription	Lung	lung
5	chr14:56615800-56626800	Weak transcription	Stomach Mucosa	stomach
6	chr14:56616000-56625800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr14:56616200-56626000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr14:56616800-56640200	Weak transcription	Fetal Stomach	stomach
9	chr14:56617200-56627000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr14:56617600-56623000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr14:56617800-56623000	Weak transcription	Fetal Lung	lung
12	chr14:56618000-56629200	Weak transcription	Rectal Smooth Muscle	rectum
13	chr14:56618200-56626400	Weak transcription	Primary hematopoietic stem cells	blood
14	chr14:56618200-56627000	Weak transcription	Gastric	stomach
15	chr14:56618800-56626000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr14:56619000-56624200	Enhancers	Dnd41	blood
17	chr14:56619000-56625800	Weak transcription	Ovary	ovary
18	chr14:56619200-56623000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr14:56619400-56626400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
20	chr14:56620000-56626000	Weak transcription	Colon Smooth Muscle	Colon
21	chr14:56620200-56623000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr14:56620200-56623200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr14:56620200-56623200	Weak transcription	Duodenum Smooth Muscle	Duodenum
24	chr14:56620400-56623000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr14:56620600-56622600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr14:56620600-56622600	Weak transcription	Muscle Satellite Cultured Cells	--
27	chr14:56620600-56622800	Weak transcription	Osteobl	bone
28	chr14:56621000-56621400	Enhancers	HUES64 Cell Line	embryonic stem cell
29	chr14:56621000-56621400	Enhancers	Primary T cells from cord blood	blood
30	chr14:56621000-56621400	Enhancers	Fetal Thymus	thymus
31	chr14:56621000-56621400	Enhancers	Pancreas	Pancrea
32	chr14:56621000-56621400	Enhancers	Small Intestine	intestine
33	chr14:56621000-56621400	Enhancers	Thymus	Thymus
34	chr14:56621200-56621400	Bivalent Enhancer	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr14:56621200-56621400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr14:56621200-56621400	Enhancers	Aorta	Aorta

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