Variant report

Variant	rs572282509
Chromosome Location	chr6:107124469-107124470
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532047	chr6:106591482-107143252	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	esv2608808	chr6:107123698-107125197	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv989863	chr6:107123802-107124897	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
4	esv3351750	chr6:107123809-107125757	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2180999	chr6:107124346-107125030	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3442652	chr6:107124413-107124935	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3473153	chr6:107124420-107124908	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3511849	chr6:107124431-107124937	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3511851	chr6:107124444-107124886	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3511850	chr6:107124446-107124866	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3473154	chr6:107124452-107124899	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3473155	chr6:107124461-107124893	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3473152	chr6:107124466-107124856	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
14	esv3511848	chr6:107124467-107124888	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:107078600-107125200	Weak transcription	Stomach Mucosa	stomach
2	chr6:107106600-107126200	Weak transcription	Psoas Muscle	Psoas
3	chr6:107114000-107125400	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr6:107116800-107124800	Weak transcription	Primary B cells from peripheral blood	blood
5	chr6:107116800-107125000	Weak transcription	Primary B cells from cord blood	blood
6	chr6:107117600-107130800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr6:107121000-107125200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr6:107121000-107125200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr6:107121200-107125400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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