The 2.0 version of rSNPBase

Variant report

Variant rs572320019
Chromosome Location chr2:173316991-173316992
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173307200-173318600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:173307400-173322400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:173307600-173321000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr2:173309000-173317000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:173310400-173318000 Enhancers Primary T helper cells fromperipheralblood blood
6 chr2:173310800-173317000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr2:173310800-173318200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr2:173310800-173318600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr2:173310800-173319800 Weak transcription Fetal Muscle Leg muscle
10 chr2:173310800-173320000 Weak transcription Lung lung
11 chr2:173310800-173322400 Weak transcription Thymus Thymus
12 chr2:173311400-173318000 Enhancers Primary T helper naive cells fromperipheralblood blood
13 chr2:173311600-173317200 Weak transcription Liver Liver
14 chr2:173311600-173319000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr2:173311600-173319200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:173311600-173319200 Weak transcription HUVEC blood vessel
17 chr2:173311800-173317200 Weak transcription Fetal Thymus thymus
18 chr2:173311800-173319200 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr2:173312200-173317000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr2:173312200-173319400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr2:173312200-173323600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:173312400-173319200 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr2:173313200-173319800 Weak transcription Fetal Kidney kidney
24 chr2:173313400-173317000 Weak transcription Fetal Lung lung
25 chr2:173313600-173323400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr2:173313800-173319200 Weak transcription HepG2 liver
27 chr2:173314000-173318600 Weak transcription Colonic Mucosa Colon
28 chr2:173314200-173319200 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr2:173314200-173319200 Weak transcription Hela-S3 cervix
30 chr2:173314400-173317200 Weak transcription Right Ventricle heart
31 chr2:173314400-173317400 Weak transcription Fetal Intestine Large intestine
32 chr2:173314400-173318600 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr2:173314400-173319400 Weak transcription Fetal Intestine Small intestine
34 chr2:173314800-173319000 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr2:173315000-173317800 Enhancers Primary T killer memory cells from peripheral blood blood
36 chr2:173315000-173320000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr2:173315000-173320800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr2:173315200-173317000 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr2:173315200-173317000 Weak transcription Esophagus oesophagus
40 chr2:173315200-173317000 Weak transcription Psoas Muscle Psoas
41 chr2:173315200-173317000 Weak transcription Stomach Mucosa stomach
42 chr2:173315200-173317200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr2:173315200-173318000 Weak transcription Small Intestine intestine
44 chr2:173315200-173318200 Enhancers Primary T cells fromperipheralblood blood
45 chr2:173315200-173319400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr2:173315200-173324800 Genic enhancers NHEK skin
47 chr2:173315400-173317000 Weak transcription Primary T cells from cord blood blood
48 chr2:173315400-173317400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr2:173315400-173319800 Weak transcription HSMM muscle
50 chr2:173315400-173320200 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015