Variant report

Variant	rs572330008
Chromosome Location	chr12:105864025-105864026
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899501	chr12:105819046-105950801	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv832507	chr12:105821685-106005186	Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1045689	chr12:105836970-105879110	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv899502	chr12:105862964-105904525	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:105860600-105866200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:105861400-105864400	Enhancers	HSMMtube	muscle
3	chr12:105862600-105865000	Enhancers	HSMM	muscle
4	chr12:105862800-105864200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr12:105863000-105864200	Enhancers	Muscle Satellite Cultured Cells	--
6	chr12:105863000-105864200	Enhancers	Aorta	Aorta
7	chr12:105863200-105884200	Weak transcription	Right Atrium	heart
8	chr12:105863400-105864200	Weak transcription	Fetal Heart	heart
9	chr12:105863800-105864800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr12:105864000-105864200	Enhancers	Right Ventricle	heart
11	chr12:105864000-105864200	Active TSS	HUVEC	blood vessel
12	chr12:105864000-105864400	ZNF genes & repeats	Fetal Kidney	kidney
13	chr12:105864000-105864600	Enhancers	Fetal Brain Male	brain
14	chr12:105864000-105866800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr12:105864000-105868400	Weak transcription	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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