Variant report

Variant	rs57236217
Chromosome Location	chr8:59143091-59143092
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11992452	1.00[EUR][1000 genomes]
rs16923372	1.00[EUR][1000 genomes]
rs58083560	1.00[EUR][1000 genomes]
rs58784157	1.00[EUR][1000 genomes]
rs60157804	1.00[EUR][1000 genomes]
rs60594139	1.00[EUR][1000 genomes]
rs60606221	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61360927	1.00[EUR][1000 genomes]
rs73243551	1.00[EUR][1000 genomes]
rs73243594	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73247437	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73247438	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73683129	1.00[EUR][1000 genomes]
rs73683548	1.00[EUR][1000 genomes]
rs73683573	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526320	chr8:59138364-59148256	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59140200-59149600	Weak transcription	Fetal Lung	lung
2	chr8:59142000-59143600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:59142200-59146400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:59142800-59144600	Enhancers	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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