The 2.0 version of rSNPBase

Variant report

Variant rs572525664
Chromosome Location chr4:152582798-152582799
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:152563800-152625200 Weak transcription Hela-S3 cervix
2 chr4:152564200-152595200 Weak transcription Aorta Aorta
3 chr4:152567400-152608600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr4:152567800-152609000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr4:152571200-152584200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr4:152571200-152584200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr4:152571600-152583600 Weak transcription Ovary ovary
8 chr4:152571600-152595000 Weak transcription HepG2 liver
9 chr4:152574400-152582800 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr4:152577200-152585000 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr4:152578400-152595200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr4:152579000-152583400 Weak transcription Duodenum Mucosa Duodenum
13 chr4:152579200-152584000 Weak transcription Colonic Mucosa Colon
14 chr4:152579200-152597400 Weak transcription Liver Liver
15 chr4:152579600-152583200 Weak transcription Esophagus oesophagus
16 chr4:152579600-152584400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr4:152579600-152585000 Weak transcription Gastric stomach
18 chr4:152579600-152587600 Weak transcription NHEK skin
19 chr4:152579600-152592200 Weak transcription Right Ventricle heart
20 chr4:152579800-152583400 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr4:152579800-152584000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr4:152579800-152585000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr4:152579800-152592800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr4:152580000-152595200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr4:152580200-152583200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr4:152580200-152583800 Weak transcription HMEC breast
27 chr4:152580200-152596000 Weak transcription Placenta Amnion Placenta Amnion
28 chr4:152580400-152583200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr4:152580400-152583200 Weak transcription Pancreas Pancrea
30 chr4:152580800-152583200 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr4:152580800-152583400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr4:152580800-152595800 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr4:152580800-152596800 Weak transcription Primary T cells from cord blood blood
34 chr4:152581000-152583400 Weak transcription H1 Cell Line embryonic stem cell
35 chr4:152581000-152592000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr4:152581200-152583200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr4:152581200-152587600 Weak transcription Dnd41 blood
38 chr4:152581200-152602800 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr4:152581200-152608400 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr4:152581400-152582800 Weak transcription Fetal Brain Female brain
41 chr4:152581400-152583000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr4:152581400-152583400 Weak transcription H9 Cell Line embryonic stem cell
43 chr4:152581400-152583400 Enhancers Skeletal Muscle Female skeletal muscle
44 chr4:152581400-152584400 Weak transcription Left Ventricle heart
45 chr4:152581400-152585000 Weak transcription Fetal Thymus thymus
46 chr4:152581400-152585000 Weak transcription HSMMtube muscle
47 chr4:152581400-152587600 Weak transcription Fetal Muscle Leg muscle
48 chr4:152581600-152583800 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr4:152581600-152595000 Weak transcription Stomach Smooth Muscle stomach
50 chr4:152581800-152583200 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015