Variant report

Variant	rs572612244
Chromosome Location	chr1:175013220-175013221
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011472	chr1:175013165-175042885	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv946512	chr1:175013171-175019073	Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:174993200-175013800	Weak transcription	Spleen	Spleen
2	chr1:175012000-175014200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr1:175012600-175013400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
4	chr1:175013000-175013400	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr1:175013000-175013400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr1:175013000-175013400	Bivalent Enhancer	Fetal Muscle Leg	muscle
7	chr1:175013000-175013400	Enhancers	Fetal Stomach	stomach
8	chr1:175013000-175013600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr1:175013000-175013600	Enhancers	Fetal Muscle Trunk	muscle
10	chr1:175013000-175013800	Enhancers	H1 Cell Line	embryonic stem cell
11	chr1:175013000-175013800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
12	chr1:175013000-175013800	Enhancers	Fetal Lung	lung
13	chr1:175013000-175014000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr1:175013000-175014000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr1:175013200-175013800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr1:175013200-175013800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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