Variant report
| Variant | rs572684224 |
|---|---|
| Chromosome Location | chr12:50017978-50017979 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:50015600-50018000 | Active TSS | Aorta | Aorta |
| 2 | chr12:50015600-50018000 | Active TSS | Fetal Kidney | kidney |
| 3 | chr12:50015600-50018000 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 4 | chr12:50015600-50018200 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr12:50015600-50018200 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
| 6 | chr12:50015800-50018000 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 7 | chr12:50015800-50018000 | Active TSS | Brain Angular Gyrus | brain |
| 8 | chr12:50015800-50018000 | Active TSS | Psoas Muscle | Psoas |
| 9 | chr12:50016000-50018200 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 10 | chr12:50016200-50018000 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 11 | chr12:50016200-50018200 | Active TSS | H9 Cell Line | embryonic stem cell |
| 12 | chr12:50016200-50018200 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 13 | chr12:50016400-50018000 | Active TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
| 14 | chr12:50016600-50018000 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr12:50016600-50018000 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
| 16 | chr12:50016600-50018000 | Active TSS | Brain Anterior Caudate | brain |
| 17 | chr12:50016600-50018000 | Active TSS | Brain Hippocampus Middle | brain |
| 18 | chr12:50016600-50018000 | Active TSS | Brain Inferior Temporal Lobe | brain |
| 19 | chr12:50016600-50018000 | Active TSS | Fetal Brain Female | brain |
| 20 | chr12:50016600-50018000 | Active TSS | Pancreas | Pancrea |
| 21 | chr12:50016600-50018200 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr12:50016800-50018000 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 23 | chr12:50016800-50018000 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 24 | chr12:50016800-50018000 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 25 | chr12:50016800-50018000 | Active TSS | Brain Germinal Matrix | brain |
| 26 | chr12:50016800-50018000 | Active TSS | Duodenum Mucosa | Duodenum |
| 27 | chr12:50016800-50018000 | Active TSS | Rectal Smooth Muscle | rectum |
| 28 | chr12:50016800-50018200 | Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 29 | chr12:50016800-50018400 | Active TSS | HSMM | muscle |
| 30 | chr12:50017000-50018000 | Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 31 | chr12:50017000-50018000 | Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 32 | chr12:50017000-50018000 | Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 33 | chr12:50017000-50018000 | Active TSS | Adipose Nuclei | Adipose |
| 34 | chr12:50017000-50018000 | Active TSS | Brain Substantia Nigra | brain |
| 35 | chr12:50017000-50018000 | Active TSS | Fetal Intestine Large | intestine |
| 36 | chr12:50017000-50018000 | Active TSS | Right Atrium | heart |
| 37 | chr12:50017000-50018000 | Active TSS | HUVEC | blood vessel |
| 38 | chr12:50017000-50018200 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 39 | chr12:50017000-50018200 | Active TSS | Primary T helper cells fromperipheralblood | blood |
| 40 | chr12:50017000-50018200 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 41 | chr12:50017000-50030600 | Weak transcription | Fetal Heart | heart |
| 42 | chr12:50017200-50018200 | Enhancers | GM12878-XiMat | blood |
| 43 | chr12:50017200-50019600 | Weak transcription | Primary T cells from cord blood | blood |
| 44 | chr12:50017200-50025600 | Weak transcription | Fetal Lung | lung |
| 45 | chr12:50017400-50018000 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 46 | chr12:50017400-50018200 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 47 | chr12:50017400-50018400 | Enhancers | Fetal Brain Male | brain |
| 48 | chr12:50017400-50019400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 49 | chr12:50017400-50019600 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 50 | chr12:50017400-50026600 | Weak transcription | Placenta Amnion | Placenta Amnion |
