Variant report

Variant	rs572691611
Chromosome Location	chr15:73659266-73659267
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904343	chr15:73396760-73775043	Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
2	nsv457202	chr15:73612377-73680301	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv569949	chr15:73612377-73680301	Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv524049	chr15:73612833-73680301	Weak transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv3388771	chr15:73659224-73662947	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73658400-73659400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
2	chr15:73658600-73659400	Flanking Bivalent TSS/Enh	ES-I3 Cell Line	embryonic stem cell
3	chr15:73658600-73659400	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
4	chr15:73658600-73660000	Active TSS	Fetal Heart	heart
5	chr15:73658600-73661800	Active TSS	Right Atrium	heart
6	chr15:73658800-73659400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr15:73658800-73659600	Flanking Bivalent TSS/Enh	Fetal Brain Female	brain
8	chr15:73658800-73660000	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
9	chr15:73658800-73660000	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr15:73659000-73659400	Bivalent Enhancer	Fetal Brain Male	brain
11	chr15:73659000-73659600	Active TSS	H9 Cell Line	embryonic stem cell
12	chr15:73659000-73659600	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
13	chr15:73659000-73659600	Enhancers	Pancreas	Pancrea
14	chr15:73659000-73660000	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
15	chr15:73659000-73660000	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr15:73659000-73660600	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr15:73659200-73659400	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr15:73659200-73659400	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
19	chr15:73659200-73659400	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
20	chr15:73659200-73659400	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
21	chr15:73659200-73659400	Bivalent/Poised TSS	Brain Germinal Matrix	brain
22	chr15:73659200-73659600	Bivalent/Poised TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr15:73659200-73659600	Active TSS	Right Ventricle	heart
24	chr15:73659200-73659800	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr15:73659200-73659800	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr15:73659200-73660000	Bivalent Enhancer	Placenta	Placenta
27	chr15:73659200-73660600	Bivalent Enhancer	Lung	lung
28	chr15:73659200-73661400	Active TSS	Left Ventricle	heart
29	chr15:73659200-73661600	Active TSS	Pancreatic Islets	Pancreatic Islet
30	chr15:73659200-73661800	Bivalent/Poised TSS	Brain Inferior Temporal Lobe	brain
31	chr15:73659200-73662000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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