Variant report
| Variant | rs57271454 |
|---|---|
| Chromosome Location | chr12:46755127-46755128 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:46737600-46761200 | Weak transcription | Gastric | stomach |
| 2 | chr12:46744000-46760600 | Weak transcription | Spleen | Spleen |
| 3 | chr12:46746000-46756800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 4 | chr12:46747000-46755600 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr12:46748800-46764200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr12:46749000-46757600 | Weak transcription | Stomach Mucosa | stomach |
| 7 | chr12:46750400-46761200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 8 | chr12:46751000-46755600 | Weak transcription | Aorta | Aorta |
| 9 | chr12:46751600-46756600 | Weak transcription | Thymus | Thymus |
| 10 | chr12:46751600-46760600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 11 | chr12:46751600-46761200 | Strong transcription | Fetal Brain Female | brain |
| 12 | chr12:46751800-46757400 | Strong transcription | HSMM | muscle |
| 13 | chr12:46751800-46759200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 14 | chr12:46752000-46757800 | Genic enhancers | A549 | lung |
| 15 | chr12:46752200-46755200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 16 | chr12:46752200-46761200 | Strong transcription | Placenta | Placenta |
| 17 | chr12:46752400-46755200 | Strong transcription | Colon Smooth Muscle | Colon |
| 18 | chr12:46752400-46755400 | Strong transcription | HUVEC | blood vessel |
| 19 | chr12:46752400-46756800 | Strong transcription | Adipose Nuclei | Adipose |
| 20 | chr12:46752400-46756800 | Strong transcription | Osteobl | bone |
| 21 | chr12:46752400-46758600 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 22 | chr12:46752400-46759000 | Strong transcription | Colonic Mucosa | Colon |
| 23 | chr12:46752400-46759800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 24 | chr12:46752400-46760400 | Strong transcription | Brain Germinal Matrix | brain |
| 25 | chr12:46752400-46761400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr12:46752400-46761600 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 27 | chr12:46752400-46761600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 28 | chr12:46752400-46761800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 29 | chr12:46752400-46764200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 30 | chr12:46752600-46755400 | Strong transcription | Primary hematopoietic stem cells | blood |
| 31 | chr12:46752600-46755400 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 32 | chr12:46752600-46755400 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 33 | chr12:46752600-46755600 | Strong transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 34 | chr12:46752600-46756200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 35 | chr12:46752600-46757000 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 36 | chr12:46752600-46757400 | Strong transcription | Placenta Amnion | Placenta Amnion |
| 37 | chr12:46752600-46758000 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 38 | chr12:46752600-46758000 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 39 | chr12:46752600-46758000 | Strong transcription | Stomach Smooth Muscle | stomach |
| 40 | chr12:46752600-46758800 | Strong transcription | Duodenum Mucosa | Duodenum |
| 41 | chr12:46752600-46758800 | Strong transcription | Fetal Intestine Large | intestine |
| 42 | chr12:46752600-46758800 | Strong transcription | NH-A | brain |
| 43 | chr12:46752600-46759000 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 44 | chr12:46752600-46759000 | Strong transcription | Fetal Lung | lung |
| 45 | chr12:46752600-46759200 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 46 | chr12:46752600-46759400 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr12:46752600-46760600 | Strong transcription | Fetal Thymus | thymus |
| 48 | chr12:46752600-46761200 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 49 | chr12:46752600-46761200 | Strong transcription | Fetal Muscle Leg | muscle |
| 50 | chr12:46752600-46761400 | Strong transcription | Primary T cells fromperipheralblood | blood |
