Variant report
| Variant | rs57276025 |
|---|---|
| Chromosome Location | chr1:220099569-220099570 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:220085400-220100000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 2 | chr1:220087200-220099600 | Weak transcription | Brain Hippocampus Middle | brain |
| 3 | chr1:220087400-220099600 | Weak transcription | Brain Angular Gyrus | brain |
| 4 | chr1:220089000-220101000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr1:220089200-220100000 | Weak transcription | Brain Germinal Matrix | brain |
| 6 | chr1:220096600-220099800 | Weak transcription | Brain Substantia Nigra | brain |
| 7 | chr1:220097800-220099600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 8 | chr1:220097800-220099800 | Weak transcription | Fetal Brain Female | brain |
| 9 | chr1:220098000-220099600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 10 | chr1:220098200-220099800 | Weak transcription | Brain Anterior Caudate | brain |
| 11 | chr1:220098400-220099600 | Genic enhancers | Fetal Intestine Small | intestine |
| 12 | chr1:220098600-220099600 | Active TSS | Liver | Liver |
| 13 | chr1:220098600-220099600 | Enhancers | HepG2 | liver |
| 14 | chr1:220098600-220099600 | Active TSS | K562 | blood |
| 15 | chr1:220099200-220099600 | Weak transcription | Right Atrium | heart |
| 16 | chr1:220099400-220099600 | Active TSS | Duodenum Mucosa | Duodenum |
| 17 | chr1:220099400-220099600 | Enhancers | Fetal Intestine Large | intestine |
| 18 | chr1:220099400-220099600 | Active TSS | Rectal Mucosa Donor 31 | rectum |
| 19 | chr1:220099400-220099600 | Enhancers | Hela-S3 | cervix |
