Variant report
| Variant | rs57279034 |
|---|---|
| Chromosome Location | chr1:86107312-86107313 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:86091800-86107600 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr1:86094000-86118600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 3 | chr1:86095400-86107600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 4 | chr1:86095400-86119000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 5 | chr1:86095400-86134800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 6 | chr1:86095600-86117000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr1:86096200-86115600 | Weak transcription | NH-A | brain |
| 8 | chr1:86101000-86107600 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 9 | chr1:86102800-86118200 | Weak transcription | K562 | blood |
| 10 | chr1:86103400-86116000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 11 | chr1:86103400-86173000 | Weak transcription | Pancreas | Pancrea |
| 12 | chr1:86103600-86107800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 13 | chr1:86103600-86113600 | Weak transcription | HSMM | muscle |
| 14 | chr1:86103600-86114000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 15 | chr1:86103600-86114000 | Weak transcription | Fetal Stomach | stomach |
| 16 | chr1:86103600-86115000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 17 | chr1:86103600-86116400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 18 | chr1:86103600-86117800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 19 | chr1:86103600-86119000 | Weak transcription | Spleen | Spleen |
| 20 | chr1:86103600-86119400 | Weak transcription | Fetal Heart | heart |
| 21 | chr1:86103600-86119800 | Weak transcription | NHLF | lung |
| 22 | chr1:86103600-86120200 | Weak transcription | HMEC | breast |
| 23 | chr1:86103600-86141200 | Weak transcription | Thymus | Thymus |
| 24 | chr1:86103600-86142200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 25 | chr1:86103600-86145400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 26 | chr1:86103600-86145600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 27 | chr1:86103600-86157400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 28 | chr1:86103600-86172600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 29 | chr1:86103600-86172600 | Weak transcription | Gastric | stomach |
| 30 | chr1:86104200-86113800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 31 | chr1:86104400-86116000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 32 | chr1:86104400-86116000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 33 | chr1:86104600-86115000 | Weak transcription | Brain Hippocampus Middle | brain |
| 34 | chr1:86104600-86117800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 35 | chr1:86105000-86108000 | Weak transcription | Fetal Brain Male | brain |
| 36 | chr1:86105000-86113800 | Weak transcription | A549 | lung |
| 37 | chr1:86105000-86118000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 38 | chr1:86105200-86107800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 39 | chr1:86105200-86113800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 40 | chr1:86105200-86113800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 41 | chr1:86105200-86113800 | Weak transcription | Primary B cells from cord blood | blood |
| 42 | chr1:86105200-86113800 | Weak transcription | Liver | Liver |
| 43 | chr1:86105200-86113800 | Weak transcription | Osteobl | bone |
| 44 | chr1:86105200-86114400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 45 | chr1:86105200-86114600 | Weak transcription | Psoas Muscle | Psoas |
| 46 | chr1:86105200-86115200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 47 | chr1:86105200-86118000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 48 | chr1:86105200-86118800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 49 | chr1:86105200-86119000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 50 | chr1:86105800-86113800 | Weak transcription | Fetal Lung | lung |
