Variant report

Variant	rs572805755
Chromosome Location	chr8:19866173-19866174
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv610759	chr8:19561997-20068842	Enhancers Strong transcription Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv498082	chr8:19722435-19873112	Bivalent Enhancer Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	esv32767	chr8:19740189-19873082	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
4	nsv1033511	chr8:19751299-20625091	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
5	esv3333894	chr8:19865969-19866465	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:19864800-19866200	Enhancers	Placenta Amnion	Placenta Amnion
2	chr8:19865000-19866200	Enhancers	H9 Cell Line	embryonic stem cell
3	chr8:19865000-19866400	Enhancers	H1 Cell Line	embryonic stem cell
4	chr8:19865000-19866400	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr8:19865000-19866600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr8:19865000-19867000	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr8:19865000-19867000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr8:19865000-19867400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr8:19865000-19867400	Enhancers	Primary T cells from cord blood	blood
10	chr8:19865200-19866200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr8:19865200-19866400	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr8:19865200-19866600	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr8:19865200-19866600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr8:19865200-19866600	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr8:19865400-19866400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr8:19865600-19866600	Enhancers	Fetal Thymus	thymus
17	chr8:19865600-19867400	Enhancers	Primary B cells from cord blood	blood
18	chr8:19865600-19869400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr8:19865600-19869600	Weak transcription	Placenta	Placenta
20	chr8:19865600-19869800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr8:19865600-19877000	Weak transcription	Left Ventricle	heart
22	chr8:19865800-19866600	Enhancers	Cortex derived primary cultured neurospheres	brain
23	chr8:19865800-19867400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr8:19865800-19868200	Weak transcription	Fetal Lung	lung
25	chr8:19866000-19866400	Weak transcription	Fetal Heart	heart

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