The 2.0 version of rSNPBase

Variant report

Variant rs572827778
Chromosome Location chr10:18453789-18453790
allele -/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:18431400-18468800 Weak transcription Brain Cingulate Gyrus brain
2 chr10:18435000-18454200 Weak transcription Brain Anterior Caudate brain
3 chr10:18435000-18467200 Weak transcription Brain Hippocampus Middle brain
4 chr10:18443800-18459000 Weak transcription Fetal Intestine Small intestine
5 chr10:18444600-18456000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr10:18444600-18457000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr10:18444600-18458400 Weak transcription Primary hematopoietic stem cells blood
8 chr10:18444600-18466800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr10:18448400-18454000 Weak transcription Left Ventricle heart
10 chr10:18448400-18454200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr10:18448400-18469000 Weak transcription Right Ventricle heart
12 chr10:18448600-18454200 Weak transcription Aorta Aorta
13 chr10:18448800-18453800 Weak transcription Fetal Brain Female brain
14 chr10:18452400-18454600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
15 chr10:18452400-18454600 Enhancers Ovary ovary
16 chr10:18452400-18456000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr10:18452600-18453800 Enhancers Fetal Heart heart
18 chr10:18452600-18454000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr10:18452600-18454000 Enhancers NHLF lung
20 chr10:18452600-18454600 Enhancers Fetal Lung lung
21 chr10:18452600-18454600 Enhancers Fetal Stomach stomach
22 chr10:18452800-18453800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr10:18452800-18454600 Enhancers Osteobl bone
24 chr10:18452800-18466600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr10:18453000-18453800 Flanking Active TSS Stomach Smooth Muscle stomach
26 chr10:18453000-18454000 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr10:18453000-18454200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr10:18453000-18454200 Weak transcription Pancreas Pancrea
29 chr10:18453000-18459600 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr10:18453200-18453800 Flanking Active TSS NHDF-Ad bronchial
31 chr10:18453200-18454200 Weak transcription Colon Smooth Muscle Colon
32 chr10:18453200-18454600 Enhancers Muscle Satellite Cultured Cells --
33 chr10:18453200-18454600 Enhancers Fetal Muscle Leg muscle
34 chr10:18453400-18454200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr10:18453400-18454200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
36 chr10:18453400-18454200 Weak transcription HSMM muscle
37 chr10:18453400-18458600 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr10:18453600-18453800 Flanking Active TSS Rectal Smooth Muscle rectum
39 chr10:18453600-18454000 Active TSS NH-A brain
40 chr10:18453600-18454200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr10:18453600-18454400 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr10:18453600-18454400 Enhancers Fetal Brain Male brain

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Last update: Aug 31, 2015