Variant report

Variant rs572845889
Chromosome Location chr9:117047768-117047769
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117005000-117050200 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr9:117012400-117054400 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr9:117013400-117067800 Weak transcription Right Ventricle heart
4 chr9:117026600-117057000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr9:117026800-117050000 Weak transcription H9 Cell Line embryonic stem cell
6 chr9:117027800-117056800 Weak transcription Colon Smooth Muscle Colon
7 chr9:117028200-117077000 Weak transcription Gastric stomach
8 chr9:117038200-117052800 Weak transcription Stomach Mucosa stomach
9 chr9:117039400-117049400 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr9:117039800-117076600 Weak transcription Lung lung
11 chr9:117040200-117053000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr9:117041800-117061800 Weak transcription Aorta Aorta
13 chr9:117042000-117050000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr9:117043000-117051000 Strong transcription HepG2 liver
15 chr9:117043200-117051800 Strong transcription Liver Liver
16 chr9:117043400-117051800 Genic enhancers Fetal Muscle Leg muscle
17 chr9:117043400-117053800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr9:117043800-117053800 Genic enhancers Fetal Muscle Trunk muscle
19 chr9:117043800-117074800 Strong transcription Fetal Intestine Large intestine
20 chr9:117043800-117075200 Weak transcription Rectal Smooth Muscle rectum
21 chr9:117044200-117057600 Weak transcription Right Atrium heart
22 chr9:117044400-117057000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr9:117044800-117055000 Strong transcription Fetal Intestine Small intestine
24 chr9:117045400-117048200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr9:117045600-117048000 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr9:117045600-117049200 Weak transcription Fetal Thymus thymus
27 chr9:117045600-117050000 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr9:117045800-117050200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr9:117046000-117048200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr9:117046000-117050400 Strong transcription Cortex derived primary cultured neurospheres brain
31 chr9:117046000-117051000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr9:117046200-117050200 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr9:117046200-117057000 Weak transcription Brain Substantia Nigra brain
34 chr9:117046400-117050600 Weak transcription Spleen Spleen
35 chr9:117046600-117050200 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr9:117046600-117051200 Genic enhancers Fetal Stomach stomach
37 chr9:117046800-117048400 Genic enhancers A549 lung
38 chr9:117046800-117048800 Enhancers NHDF-Ad bronchial
39 chr9:117046800-117049800 Weak transcription HMEC breast
40 chr9:117047000-117047800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr9:117047000-117050600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr9:117047200-117048400 Enhancers Placenta Amnion Placenta Amnion
43 chr9:117047200-117048800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr9:117047200-117048800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr9:117047200-117048800 Enhancers NH-A brain
46 chr9:117047400-117047800 Genic enhancers HUES6 Cell Line embryonic stem cell
47 chr9:117047400-117047800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
48 chr9:117047400-117047800 Active TSS Fetal Brain Male brain
49 chr9:117047400-117048000 Enhancers Muscle Satellite Cultured Cells --
50 chr9:117047400-117048400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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