Variant report

Variant rs572912
Chromosome Location chr1:228489203-228489204
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228464200-228491600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:228465000-228498000 Weak transcription Fetal Brain Male brain
3 chr1:228472200-228490000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:228480400-228489600 Strong transcription HSMMtube muscle
5 chr1:228481000-228493600 Strong transcription Fetal Muscle Trunk muscle
6 chr1:228482400-228492200 Strong transcription Skeletal Muscle Female skeletal muscle
7 chr1:228484200-228491000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:228484600-228490800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
9 chr1:228484600-228490800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr1:228484800-228490600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
11 chr1:228485600-228489400 Strong transcription Fetal Brain Female brain
12 chr1:228485600-228489800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:228485800-228491800 ZNF genes & repeats H1 Cell Line embryonic stem cell
14 chr1:228486400-228489800 Weak transcription Psoas Muscle Psoas
15 chr1:228487000-228490800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
16 chr1:228487200-228491600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:228487200-228504600 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:228487400-228490800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:228488000-228489800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:228488200-228491400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
21 chr1:228488400-228490600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
22 chr1:228488400-228490800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
23 chr1:228488400-228490800 ZNF genes & repeats Dnd41 blood
24 chr1:228488400-228491600 Strong transcription Skeletal Muscle Male skeletal muscle
25 chr1:228488400-228492000 ZNF genes & repeats A549 lung
26 chr1:228488600-228489400 Weak transcription Fetal Heart heart
27 chr1:228488800-228490600 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:228488800-228492200 ZNF genes & repeats Fetal Muscle Leg muscle
29 chr1:228489000-228489600 ZNF genes & repeats Spleen Spleen
30 chr1:228489000-228490800 ZNF genes & repeats Brain Anterior Caudate brain
31 chr1:228489000-228491000 ZNF genes & repeats Brain Germinal Matrix brain
32 chr1:228489000-228491200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
33 chr1:228489000-228491400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:228489000-228491400 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
35 chr1:228489000-228491800 ZNF genes & repeats Adipose Nuclei Adipose
36 chr1:228489200-228489400 ZNF genes & repeats Primary T cells fromperipheralblood blood
37 chr1:228489200-228490400 Weak transcription Right Ventricle heart
38 chr1:228489200-228490800 ZNF genes & repeats Fetal Lung lung
39 chr1:228489200-228491000 ZNF genes & repeats Primary T cells from cord blood blood
40 chr1:228489200-228491400 ZNF genes & repeats Left Ventricle heart
41 chr1:228489200-228491600 ZNF genes & repeats Duodenum Mucosa Duodenum

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