Variant report

Variant	rs572962148
Chromosome Location	chr3:23108642-23108643
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3333856	chr3:23108609-23108840	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23103200-23109200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:23105000-23109000	Weak transcription	Primary B cells from cord blood	blood
3	chr3:23105000-23109200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr3:23105000-23121400	Weak transcription	Psoas Muscle	Psoas
5	chr3:23105200-23108800	Weak transcription	Primary B cells from peripheral blood	blood
6	chr3:23105200-23108800	Weak transcription	Primary hematopoietic stem cells	blood
7	chr3:23108400-23111000	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr3:23108400-23115600	Weak transcription	Fetal Lung	lung
9	chr3:23108600-23109200	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr3:23108600-23109200	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr3:23108600-23110400	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr3:23108600-23112400	Enhancers	Primary hematopoietic stem cells short term culture	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links