The 2.0 version of rSNPBase

Variant report

Variant rs572980599
Chromosome Location chr6:37361067-37361068
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37324000-37366800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr6:37328000-37361800 Strong transcription Dnd41 blood
3 chr6:37328600-37361200 Strong transcription Primary T cells fromperipheralblood blood
4 chr6:37334400-37363200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr6:37337400-37362600 Weak transcription Psoas Muscle Psoas
6 chr6:37337600-37363200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr6:37337600-37363200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr6:37339800-37361400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr6:37342400-37362000 Strong transcription Adipose Nuclei Adipose
10 chr6:37343000-37363600 Strong transcription Fetal Stomach stomach
11 chr6:37343000-37365000 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr6:37344000-37361800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr6:37345600-37363400 Weak transcription HUVEC blood vessel
14 chr6:37346000-37362400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:37347600-37363000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr6:37349800-37363800 Weak transcription Colon Smooth Muscle Colon
17 chr6:37350000-37368600 Weak transcription Fetal Heart heart
18 chr6:37352600-37363400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:37353800-37361200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr6:37353800-37361200 Strong transcription HUES6 Cell Line embryonic stem cell
21 chr6:37353800-37361800 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr6:37353800-37362000 Strong transcription HUES48 Cell Line embryonic stem cell
23 chr6:37353800-37362000 Strong transcription Primary B cells from cord blood blood
24 chr6:37353800-37363400 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr6:37353800-37363800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:37354000-37361200 Strong transcription Fetal Thymus thymus
27 chr6:37354000-37361600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr6:37354000-37361600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:37354000-37361600 Strong transcription HepG2 liver
30 chr6:37354000-37363000 Strong transcription Duodenum Smooth Muscle Duodenum
31 chr6:37354200-37361200 Strong transcription Primary B cells from peripheral blood blood
32 chr6:37354200-37361600 Strong transcription Brain Inferior Temporal Lobe brain
33 chr6:37354400-37361200 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr6:37355600-37361400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr6:37355600-37361600 Strong transcription H1 Cell Line embryonic stem cell
36 chr6:37355600-37362800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr6:37355800-37361600 Strong transcription iPS-20b Cell Line embryonic stem cell
38 chr6:37355800-37361800 Strong transcription Primary T helper cells fromperipheralblood blood
39 chr6:37355800-37361800 Strong transcription Brain Anterior Caudate brain
40 chr6:37356200-37361200 Strong transcription Osteobl bone
41 chr6:37356200-37361800 Strong transcription Aorta Aorta
42 chr6:37356200-37367400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:37356600-37362000 Strong transcription HMEC breast
44 chr6:37356600-37362800 Weak transcription Right Ventricle heart
45 chr6:37356800-37363800 Strong transcription Brain Cingulate Gyrus brain
46 chr6:37357400-37361600 Strong transcription Stomach Smooth Muscle stomach
47 chr6:37357400-37362200 Strong transcription H9 Cell Line embryonic stem cell
48 chr6:37357600-37361200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr6:37357600-37364400 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr6:37357800-37361600 Strong transcription Left Ventricle heart

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Last update: Aug 31, 2015