Variant report

Variant	rs572992870
Chromosome Location	chr14:69727248-69727249
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69618346..69620839-chr14:69725644..69728530,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DCAF5-2	chr14:69727007-69727284	ENSG00000258520

Variant related genes	Relation type
ENSG00000139990	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3421651	chr14:69725724-69728572	Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv3363263	chr14:69725949-69729047	Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:113 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69725400-69728400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
2	chr14:69725600-69728400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
3	chr14:69725800-69728600	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
4	chr14:69726000-69727400	Bivalent/Poised TSS	Muscle Satellite Cultured Cells	--
5	chr14:69726000-69727600	Bivalent Enhancer	Primary B cells from peripheral blood	blood
6	chr14:69726000-69727800	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
7	chr14:69726000-69727800	Active TSS	A549	lung
8	chr14:69726000-69727800	Bivalent/Poised TSS	Osteobl	bone
9	chr14:69726000-69728200	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
10	chr14:69726000-69728400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
11	chr14:69726000-69728400	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr14:69726000-69728400	Active TSS	Pancreatic Islets	Pancreatic Islet
13	chr14:69726000-69728600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr14:69726000-69728600	Active TSS	Right Atrium	heart
15	chr14:69726200-69727400	Bivalent/Poised TSS	Placenta Amnion	Placenta Amnion
16	chr14:69726200-69727600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr14:69726200-69727600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr14:69726200-69727600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr14:69726200-69727600	Active TSS	Brain Substantia Nigra	brain
20	chr14:69726200-69727600	Weak transcription	Fetal Brain Male	brain
21	chr14:69726200-69727600	Weak transcription	Fetal Heart	heart
22	chr14:69726200-69728000	Bivalent/Poised TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr14:69726200-69728200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr14:69726200-69728200	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr14:69726200-69728200	Active TSS	Aorta	Aorta
26	chr14:69726200-69728400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr14:69726200-69728400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
28	chr14:69726200-69728400	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
29	chr14:69726200-69728400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
30	chr14:69726200-69728400	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr14:69726200-69728400	Active TSS	Brain Anterior Caudate	brain
32	chr14:69726200-69728400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
33	chr14:69726400-69727400	Bivalent/Poised TSS	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr14:69726400-69727400	Bivalent/Poised TSS	Breast Myoepithelial Primary Cells	Breast
35	chr14:69726400-69727400	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr14:69726400-69727400	Bivalent/Poised TSS	Brain Germinal Matrix	brain
37	chr14:69726400-69727400	Bivalent/Poised TSS	Psoas Muscle	Psoas
38	chr14:69726400-69727400	Active TSS	NH-A	brain
39	chr14:69726400-69727600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr14:69726400-69727600	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
41	chr14:69726400-69727600	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
42	chr14:69726400-69727600	Active TSS	Fetal Intestine Large	intestine
43	chr14:69726400-69727600	Bivalent/Poised TSS	Fetal Muscle Leg	muscle
44	chr14:69726400-69727600	Bivalent/Poised TSS	Fetal Stomach	stomach
45	chr14:69726400-69727600	Bivalent/Poised TSS	Rectal Mucosa Donor 31	rectum
46	chr14:69726400-69727600	Bivalent/Poised TSS	Stomach Mucosa	stomach
47	chr14:69726400-69727600	Active TSS	NHLF	lung
48	chr14:69726400-69727800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr14:69726400-69727800	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
50	chr14:69726400-69728000	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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